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| Predicate | Object |
|---|---|
| rdf:type | |
| lifeskim:mentions | |
| pubmed:issue |
1
|
| pubmed:dateCreated |
1996-12-3
|
| pubmed:abstractText |
CENSOR is a program designed to identify and eliminate fragments of DNA sequences homologous to any chosen reference sequences, in particular to repetitive elements. CENSOR is based on two principal algorithms of Smith & Waterman (1981) [J. Mol. Biol. 147, 195] and Wilbur & Lipman (1983) [Proc. Natl. Acad. Sci. U.S.A. 80, 726]. It includes several pre-set sensitivity levels based on both biological and statistical criteria which help to distinguish between aligned pairs of homologous and non-homologous sequences. CENSOR has been implemented in C/C + + in the SUN/UNIX environment.
|
| pubmed:language |
eng
|
| pubmed:journal | |
| pubmed:citationSubset |
IM
|
| pubmed:status |
MEDLINE
|
| pubmed:month |
Mar
|
| pubmed:issn |
0097-8485
|
| pubmed:author | |
| pubmed:issnType |
Print
|
| pubmed:volume |
20
|
| pubmed:owner |
NLM
|
| pubmed:authorsComplete |
Y
|
| pubmed:pagination |
119-21
|
| pubmed:dateRevised |
2006-11-15
|
| pubmed:meshHeading |
pubmed-meshheading:8867843-Algorithms,
pubmed-meshheading:8867843-Base Sequence,
pubmed-meshheading:8867843-Computer Communication Networks,
pubmed-meshheading:8867843-Computers,
pubmed-meshheading:8867843-Databases, Factual,
pubmed-meshheading:8867843-Molecular Sequence Data,
pubmed-meshheading:8867843-Repetitive Sequences, Nucleic Acid,
pubmed-meshheading:8867843-Sequence Alignment,
pubmed-meshheading:8867843-Sequence Analysis,
pubmed-meshheading:8867843-Software
|
| pubmed:year |
1996
|
| pubmed:articleTitle |
CENSOR--a program for identification and elimination of repetitive elements from DNA sequences.
|
| pubmed:affiliation |
Linus Pauling Institute of Science and Medicine, Palo Alto, CA 94306, USA.
|
| pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.
|