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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
5
pubmed:dateCreated
1996-6-21
pubmed:abstractText
The majority of T-cell clones derived from a donor who experienced dengue illness following receipt of a live experimental dengue virus type 3 (DEN3) vaccine cross-reacted with all four serotypes of dengue virus, but some were serotype specific or only partially cross-reactive. The nonstructural protein, NS3, was immuno-dominant in the CD4+ T-cell response of this donor. The epitopes of four NS3-specific T-cell clones were analyzed. JK15 and JK13 recognized only DEN3 NS3, while JK44 recognized DEN1, DEN2, and DEN3 NS3 and JK5 recognized DEN1, DEN3, and West Nile virus NS3. The epitopes recognized by these clones on the DEN3 NS3 protein were localized with recombinant vaccinia viruses expressing truncated regions of the NS3 gene, and then the minimal recognition sequence was mapped with synthetic peptides. Amino acids critical for T-cell recognition were assessed by using peptides with amino acid substitutions. One of the serotype-specific clones (JK13) and the subcomplex- and flavivirus-cross-reactive clone (JK5) recognized the same core epitope, WITDFVGKTVW. The amino acid at the sixth position of this epitope is critical for recognition by both clones. Sequence analysis of the T-cell receptors of these two clones showed that they utilize different VP chains. The core epitopes for the four HLA-DR15-restricted CD4+ CTL clones studied do not contain motifs similar to those proposed by previous studies on endogenous peptides eluted from HLA-DR15 molecules. However, the majority of these dengue virus NS3 core epitopes have a positive amino acid (K or R) at position 8 or 9. Our results indicate that a single epitope can induce T cells with different virus specificities despite the restriction of these T cells by the same HLA-DR15 allele. This finding suggests a previously unappreciated level of complexity for interactions between human T-cell receptors and viral epitopes with very similar sequences on infected cells.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1319610, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1531368, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1585663, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1617166, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1656278, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1690768, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1704395, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1705990, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-1939640, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2098928, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2129562, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2174669, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2345967, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2440339, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2463381, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2475573, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2476570, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2511337, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2521489, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2665015, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2714651, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-271968, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-2786087, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-3039728, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-3277268, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-6321770, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-6612990, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-7529799, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-7544398, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-7690424, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-7836058, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-8146129, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-8245442, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-8301126, http://linkedlifedata.com/resource/pubmed/commentcorrection/8627790-8315383
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0022-538X
pubmed:author
pubmed:issnType
Print
pubmed:volume
70
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3108-17
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:8627790-Amino Acid Sequence, pubmed-meshheading:8627790-Animals, pubmed-meshheading:8627790-CD4-Positive T-Lymphocytes, pubmed-meshheading:8627790-Cercopithecus aethiops, pubmed-meshheading:8627790-Clone Cells, pubmed-meshheading:8627790-Cross Reactions, pubmed-meshheading:8627790-Cytotoxicity, Immunologic, pubmed-meshheading:8627790-Dengue, pubmed-meshheading:8627790-Dengue Virus, pubmed-meshheading:8627790-Epitopes, pubmed-meshheading:8627790-HLA-DR Antigens, pubmed-meshheading:8627790-Histocompatibility Testing, pubmed-meshheading:8627790-Humans, pubmed-meshheading:8627790-Molecular Sequence Data, pubmed-meshheading:8627790-Polymerase Chain Reaction, pubmed-meshheading:8627790-RNA Helicases, pubmed-meshheading:8627790-Receptors, Antigen, T-Cell, alpha-beta, pubmed-meshheading:8627790-Sequence Homology, Amino Acid, pubmed-meshheading:8627790-Serine Endopeptidases, pubmed-meshheading:8627790-Serotyping, pubmed-meshheading:8627790-Vero Cells, pubmed-meshheading:8627790-Viral Nonstructural Proteins, pubmed-meshheading:8627790-Viral Vaccines
pubmed:year
1996
pubmed:articleTitle
Identification of amino acids involved in recognition by dengue virus NS3-specific, HLA-DR15-restricted cytotoxic CD4+ T-cell clones.
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