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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
1996-6-13
pubmed:abstractText
We characterized in detail the actin binding site of the small actin-sequestering protein thymosin beta 4 (T beta 4) using chemically synthesized full-length T beta 4 variants. The N-terminal part (residues 1-16) and a hexapeptide motif (residues 17-22) form separate structural entities. In both, we identified charged and hydrophobic residues that participate in the actin interaction using chemical cross-linking, complex formation in native gels and actin-sequestering experiments. Quantitative data on the activity of the variants and circular dichroism experiments allow to present a model in which the N-terminal part needs to adopt an alpha-helix for actin binding and interacts through a patch of hydrophobic residues (6M-I-F12) on one side of this helix. Also, electrostatic contacts between actin and lysine residues 18, in the motif, and 14, in the N-terminal alpha-helix, appear important for binding. The residues critical for contacting actin are conserved throughout the beta-thymosin family and in addition to this we identify a similar pattern in the C-terminal headpiece of villin and dematin.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-1464307, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-1558752, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-1584803, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-1623524, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-1627561, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-1869561, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-2261438, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-2395459, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-2543235, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-2846586, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-3293583, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-3381086, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-3740412, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-4254541, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-7011802, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-7061452, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-7558589, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-7919232, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-7929793, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-7945275, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-8194107, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-8223720, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-8252614, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-8269922, http://linkedlifedata.com/resource/pubmed/commentcorrection/8617195-8341682
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Actins, http://linkedlifedata.com/resource/pubmed/chemical/Blood Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Calcium-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Carrier Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Cross-Linking Reagents, http://linkedlifedata.com/resource/pubmed/chemical/EPB49 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Membrane Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Microfilament Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Peptide Fragments, http://linkedlifedata.com/resource/pubmed/chemical/Phosphoproteins, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Thymosin, http://linkedlifedata.com/resource/pubmed/chemical/thymosin beta(4), http://linkedlifedata.com/resource/pubmed/chemical/villin
pubmed:status
MEDLINE
pubmed:month
Jan
pubmed:issn
0261-4189
pubmed:author
pubmed:issnType
Print
pubmed:day
15
pubmed:volume
15
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
201-10
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:8617195-Actins, pubmed-meshheading:8617195-Amino Acid Sequence, pubmed-meshheading:8617195-Animals, pubmed-meshheading:8617195-Binding, Competitive, pubmed-meshheading:8617195-Binding Sites, pubmed-meshheading:8617195-Blood Proteins, pubmed-meshheading:8617195-Calcium-Binding Proteins, pubmed-meshheading:8617195-Carrier Proteins, pubmed-meshheading:8617195-Chickens, pubmed-meshheading:8617195-Circular Dichroism, pubmed-meshheading:8617195-Conserved Sequence, pubmed-meshheading:8617195-Cross-Linking Reagents, pubmed-meshheading:8617195-Genetic Variation, pubmed-meshheading:8617195-Humans, pubmed-meshheading:8617195-Kinetics, pubmed-meshheading:8617195-Membrane Proteins, pubmed-meshheading:8617195-Microfilament Proteins, pubmed-meshheading:8617195-Molecular Sequence Data, pubmed-meshheading:8617195-Muscle, Skeletal, pubmed-meshheading:8617195-Mutagenesis, Site-Directed, pubmed-meshheading:8617195-Peptide Fragments, pubmed-meshheading:8617195-Phosphoproteins, pubmed-meshheading:8617195-Protein Structure, Secondary, pubmed-meshheading:8617195-Rabbits, pubmed-meshheading:8617195-Recombinant Proteins, pubmed-meshheading:8617195-Sequence Homology, Amino Acid, pubmed-meshheading:8617195-Thymosin
pubmed:year
1996
pubmed:articleTitle
The actin binding site of thymosin beta 4 mapped by mutational analysis.
pubmed:affiliation
Department of Biochemistry, University of Ghent, Belgium.
pubmed:publicationType
Journal Article
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