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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
21
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pubmed:dateCreated |
1993-11-26
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pubmed:abstractText |
The binding modes of a series of penicillin-derived C2 symmetric dimer inhibitors of HIV-1 proteinase were investigated by NMR, protein crystallography, and molecular modeling. The compounds were found to bind in a symmetrical fashion, tracing and S-shaped course through the active site, with good hydrophobic interactions in the S1/S1' and S2/S2' pockets and hydrogen bonding of inhibitor amide groups. Interactions with the catalytic aspartates appeared poor and the protein conformation was very similar to that seen in complexes with peptidomimetics, in spite of the major differences in ligand structure.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Oct
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pubmed:issn |
0022-2623
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
15
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pubmed:volume |
36
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
3113-9
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pubmed:dateRevised |
2001-11-13
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pubmed:meshHeading |
pubmed-meshheading:8230097-Amino Acid Sequence,
pubmed-meshheading:8230097-Binding Sites,
pubmed-meshheading:8230097-Crystallography,
pubmed-meshheading:8230097-HIV Protease,
pubmed-meshheading:8230097-HIV Protease Inhibitors,
pubmed-meshheading:8230097-Magnetic Resonance Spectroscopy,
pubmed-meshheading:8230097-Models, Molecular,
pubmed-meshheading:8230097-Molecular Sequence Data,
pubmed-meshheading:8230097-Penicillins,
pubmed-meshheading:8230097-Structure-Activity Relationship
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pubmed:year |
1993
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pubmed:articleTitle |
A series of penicillin-derived C2-symmetric inhibitors of HIV-1 proteinase: structural and modeling studies.
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pubmed:affiliation |
Protein Structure Group, Glaxo Group Research Limited, Greenford, Middlesex, United Kingdom.
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pubmed:publicationType |
Journal Article
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