Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
1994-6-24
pubmed:databankReference
pubmed:abstractText
We previously described a bloodstream Trypansoma rhodesiense clone, MVAT5-Rx2, whose isolation was based on its cross-reactivity with a monoclonal antibody (MAb) directed against a metacyclic variant surface glycoprotein (VSG). When the duplicated, expressed VSG gene in MVAT5-Rx2 was compared with its donor (basic copy) gene, 11 nucleotide differences were found in the respective 1.5-kb coding regions (Y. Lu, T. Hall, L. S. Gay, and J. E. Donelson, Cell 72:397-406, 1993). Here we describe a characterization of two additional bloodstream trypanosome clones, MVAT5-Rx1 and MVAT5-Rx3, whose VSGs are expressed from duplicated copies of the same donor VSG gene. The three trypanosome clones each react with the MVAT5-specific MAb, but they have different cross-reactivities with a panel of other MAbs, suggesting that their surface epitopes are similar but nonidentical. Each of the three gene duplication events occurs at a different 5' crossover site within a 76-bp repeat and is associated with a different set of point mutations. The 35, 11, and 28 point mutations in the duplicated VSG coding regions of Rx1, Rx2, and Rx3, respectively, exhibit a strand bias. In the sense strand, of the 74 total mutations generated in the three duplications, 54% are A-to-G or G-to-A (A:G) transitions and 7% are C:T transitions, while 26% are C:A transversions and 13% are C:G transversions. No T:G or T:A transversions occurred. Possible models for the generation of these point mutations are discussed.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-113458, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-1172191, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-1380125, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-150254, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-15463711, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-1674368, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2065016, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2409439, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2411331, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2412122, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2574459, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2591373, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2792762, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2797873, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-2874767, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-3041210, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-3059263, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-3304138, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-3516005, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6087278, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6180019, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6196642, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6292859, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6319025, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6324125, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6328412, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6330689, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6593722, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6616615, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-6927851, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-8342022, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-8381717, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-8423816, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-8464512, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-8465200, http://linkedlifedata.com/resource/pubmed/commentcorrection/8196636-92203
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
0270-7306
pubmed:author
pubmed:issnType
Print
pubmed:volume
14
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3971-80
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:8196636-Amino Acid Sequence, pubmed-meshheading:8196636-Animals, pubmed-meshheading:8196636-Antibodies, Monoclonal, pubmed-meshheading:8196636-Base Sequence, pubmed-meshheading:8196636-Blotting, Southern, pubmed-meshheading:8196636-Cloning, Molecular, pubmed-meshheading:8196636-Cross Reactions, pubmed-meshheading:8196636-Crossing Over, Genetic, pubmed-meshheading:8196636-DNA, Protozoan, pubmed-meshheading:8196636-DNA Primers, pubmed-meshheading:8196636-Fluorescent Antibody Technique, pubmed-meshheading:8196636-Gene Conversion, pubmed-meshheading:8196636-Gene Expression, pubmed-meshheading:8196636-Molecular Sequence Data, pubmed-meshheading:8196636-Point Mutation, pubmed-meshheading:8196636-Polymerase Chain Reaction, pubmed-meshheading:8196636-Repetitive Sequences, Nucleic Acid, pubmed-meshheading:8196636-Sequence Homology, Amino Acid, pubmed-meshheading:8196636-Sequence Homology, Nucleic Acid, pubmed-meshheading:8196636-Trypanosoma brucei rhodesiense, pubmed-meshheading:8196636-Variant Surface Glycoproteins, Trypanosoma
pubmed:year
1994
pubmed:articleTitle
A strand bias occurs in point mutations associated with variant surface glycoprotein gene conversion in Trypanosoma rhodesiense.
pubmed:affiliation
Genetics Ph.D. Program, University of Iowa, Iowa City 52242.
pubmed:publicationType
Journal Article, Comparative Study