Switch to
Predicate | Object |
---|---|
rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
|
pubmed:dateCreated |
1995-7-12
|
pubmed:abstractText |
Fourier transform infrared (FTIR) spectroscopy has been used to explore the thermal unfolding of three helical, alanine-based peptides. Each of the peptides follows the general sequence Ac-(AAAX)nA-NH2 where X is either Lys+ or Arg+ and n = 3 or 4. These particular peptides were chosen because they contain varying amounts of 3(10)- and alpha-helix. The amide I' bands for all three peptides, under helix forming conditions, are between 1632 and 1635 cm-1. These results are incongruous with the assignment for alpha-helices in proteins where amide I' bands are usually found above 1650 cm-1. At elevated temperatures, all the peptides exhibit amide I' bands of 1642 cm-1, which is the accepted value for random coil. Variable temperature spectra for the 4K peptide (n = 4, X = Lys+), which is the most alpha-helical of the three peptides at 1 degree C, reveal an isosbestic point suggesting a cooperative two-state unfolding transition. The other peptides, however, did not reveal an isosbestic point, thereby indicating the presence of an intermediate, perhaps 3(10)-helix, along the thermal unfolding pathway.
|
pubmed:grant | |
pubmed:language |
eng
|
pubmed:journal | |
pubmed:citationSubset |
IM
|
pubmed:chemical | |
pubmed:status |
MEDLINE
|
pubmed:issn |
1047-8477
|
pubmed:author | |
pubmed:issnType |
Print
|
pubmed:volume |
114
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
23-7
|
pubmed:dateRevised |
2008-11-21
|
pubmed:meshHeading |
pubmed-meshheading:7772415-Alanine,
pubmed-meshheading:7772415-Amides,
pubmed-meshheading:7772415-Amino Acid Sequence,
pubmed-meshheading:7772415-Hot Temperature,
pubmed-meshheading:7772415-Hydrogen Bonding,
pubmed-meshheading:7772415-Molecular Sequence Data,
pubmed-meshheading:7772415-Peptides,
pubmed-meshheading:7772415-Protein Denaturation,
pubmed-meshheading:7772415-Protein Structure, Secondary,
pubmed-meshheading:7772415-Spectroscopy, Fourier Transform Infrared
|
pubmed:articleTitle |
FTIR spectroscopy of alanine-based peptides: assignment of the amide I' modes for random coil and helix.
|
pubmed:affiliation |
Department of Chemistry and Biochemistry, University of California, Santa Cruz 95064, USA.
|
pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.
|