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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:dateCreated |
1993-7-30
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pubmed:abstractText |
A commonly used RNA isolation technique that employs a single-step acid phenol-chloroform extraction (Chomczynski and Sacchi, 1987) produces a different distribution pattern of C. erythrocephala c-abl (Ceabl) transcripts following Northern blot analysis than methods that rely on phenol-chloroform extraction at basic pH (Jowett, 1986). Only Ceabl transcripts of 10.5 kb and 6.5 kb are recovered, while Ceabl transcripts of 9 kb and 4.4 kb are lost, when acidic phenol-chloroform methods are used. All tested extraction methods which do not rely on phenol-chloroform extraction under acidic conditions can recover Ceabl transcripts of 10.5 kb, 9 kb, 6.5 kb and 4.4 kb. The reason for this discrepancy is apparently due to differential loss of mRNA at the phenol phase and/or interphase boundary during the acidic extractions.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
B
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Acids,
http://linkedlifedata.com/resource/pubmed/chemical/Chloroform,
http://linkedlifedata.com/resource/pubmed/chemical/Phenol,
http://linkedlifedata.com/resource/pubmed/chemical/Phenols,
http://linkedlifedata.com/resource/pubmed/chemical/Protein-Tyrosine Kinases,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Messenger
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pubmed:status |
MEDLINE
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pubmed:issn |
1052-6781
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
6
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pubmed:geneSymbol |
Ceabl
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
21-30
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pubmed:dateRevised |
2009-11-19
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pubmed:meshHeading |
pubmed-meshheading:7763703-Acids,
pubmed-meshheading:7763703-Animals,
pubmed-meshheading:7763703-Biotechnology,
pubmed-meshheading:7763703-Chloroform,
pubmed-meshheading:7763703-Diptera,
pubmed-meshheading:7763703-Phenol,
pubmed-meshheading:7763703-Phenols,
pubmed-meshheading:7763703-Protein-Tyrosine Kinases,
pubmed-meshheading:7763703-RNA, Messenger,
pubmed-meshheading:7763703-Transcription, Genetic
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pubmed:year |
1993
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pubmed:articleTitle |
Differential recovery of mRNA transcripts using acid organic extraction techniques: quantification of abl mRNA abundance in the blowfly, Calliphora erythrocephala.
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pubmed:affiliation |
Department of Zoology, University of Oklahoma, Norman 73019.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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