Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
10
pubmed:dateCreated
1995-6-16
pubmed:databankReference
pubmed:abstractText
Holocarboxylase synthetase (HCS) catalyzes the biotinylation of the four biotin-dependent carboxylases in human cells. Patients with HCS deficiency lack activity of all four carboxylases, indicating that a single HCS is targeted to the mitochondria and cytoplasm. We isolated 21 human HCS cDNA clones, in four size classes of 2.0-4.0 kb, by complementation of an Escherichia coli birA mutant defective in biotin ligase. Expression of the cDNA clones promoted biotinylation of the bacterial biotinyl carboxyl carrier protein as well as a carboxyl-terminal fragment of the alpha subunit of human propionyl-CoA carboxylase expressed from a plasmid. The open reading frame encodes a predicted protein of 726 aa and M(r) 80,759. Northern blot analysis revealed the presence of a 5.8-kb major species and 4.0-, 4.5-, and 8.5-kb minor species of poly(A)+ RNA in human tissues. Human HCS shows specific regions of homology with the BirA protein of E. coli and the presumptive biotin ligase of Paracoccus denitrificans. Several forms of HCS mRNA are generated by alternative splicing, and as a result, two mRNA molecules bear different putative translation initiation sites. A sequence upstream of the first translation initiation site encodes a peptide structurally similar to mitochondrial presequences, but it lacks an in-frame ATG codon to direct its translation. We anticipate that alternative splicing most likely mediates the mitochondrial versus cytoplasmic expression, although the elements required for directing the enzyme to the mitochondria remain to be confirmed.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-115903, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1339350, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1370469, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1409631, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1416987, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1633825, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1848010, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-1946403, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-20039, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-2290832, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-2642391, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-2667763, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-2828382, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-2896195, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-3536662, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-3762694, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-3899863, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-4559599, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6112081, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6122961, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6129246, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6329717, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6456358, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6614920, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6782078, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-6798072, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-7024555, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-7102675, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-7842009, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-8053691, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-8083196, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-8175883, http://linkedlifedata.com/resource/pubmed/commentcorrection/7753853-8422400
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Bacterial Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Biotin, http://linkedlifedata.com/resource/pubmed/chemical/Carbon-Nitrogen Ligases, http://linkedlifedata.com/resource/pubmed/chemical/Carboxy-Lyases, http://linkedlifedata.com/resource/pubmed/chemical/DNA, Complementary, http://linkedlifedata.com/resource/pubmed/chemical/Escherichia coli Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Ligases, http://linkedlifedata.com/resource/pubmed/chemical/Methylmalonyl-CoA Decarboxylase, http://linkedlifedata.com/resource/pubmed/chemical/RNA, Messenger, http://linkedlifedata.com/resource/pubmed/chemical/Repressor Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/birA protein, E coli, http://linkedlifedata.com/resource/pubmed/chemical/holocarboxylase synthetases
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
9
pubmed:volume
92
pubmed:geneSymbol
birA
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
4626-30
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:7753853-Humans, pubmed-meshheading:7753853-Carboxy-Lyases, pubmed-meshheading:7753853-Biotin, pubmed-meshheading:7753853-Escherichia coli, pubmed-meshheading:7753853-Base Sequence, pubmed-meshheading:7753853-Genes, Bacterial, pubmed-meshheading:7753853-RNA, Messenger, pubmed-meshheading:7753853-Ligases, pubmed-meshheading:7753853-Bacterial Proteins, pubmed-meshheading:7753853-Amino Acid Sequence, pubmed-meshheading:7753853-Genetic Complementation Test, pubmed-meshheading:7753853-Molecular Sequence Data, pubmed-meshheading:7753853-Transcription, Genetic, pubmed-meshheading:7753853-Escherichia coli Proteins, pubmed-meshheading:7753853-Cloning, Molecular, pubmed-meshheading:7753853-Repressor Proteins, pubmed-meshheading:7753853-Paracoccus denitrificans, pubmed-meshheading:7753853-Sequence Homology, Amino Acid, pubmed-meshheading:7753853-DNA, Complementary
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