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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6437
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pubmed:dateCreated |
1993-8-26
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pubmed:abstractText |
RNAs that contain specific high-affinity binding sites for small molecule ligands immobilized on a solid support are present at a frequency of roughly one in 10(10)-10(11) in pools of random sequence RNA molecules. Here we describe a new in vitro selection procedure designed to ensure the isolation of RNAs that bind the ligand of interest in solution as well as on a solid support. We have used this method to isolate a remarkably small RNA motif that binds ATP, a substrate in numerous biological reactions and the universal biological high-energy intermediate. The selected ATP-binding RNAs contain a consensus sequence, embedded in a common secondary structure. The binding properties of ATP analogues and modified RNAs show that the binding interaction is characterized by a large number of close contacts between the ATP and RNA, and by a change in the conformation of the RNA.
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pubmed:keyword | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Aug
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pubmed:issn |
0028-0836
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
5
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pubmed:volume |
364
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
550-3
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:7687750-Adenosine Triphosphate,
pubmed-meshheading:7687750-Base Sequence,
pubmed-meshheading:7687750-Binding Sites,
pubmed-meshheading:7687750-Chromatography,
pubmed-meshheading:7687750-Consensus Sequence,
pubmed-meshheading:7687750-DNA,
pubmed-meshheading:7687750-Molecular Sequence Data,
pubmed-meshheading:7687750-Nucleic Acid Conformation,
pubmed-meshheading:7687750-RNA
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pubmed:year |
1993
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pubmed:articleTitle |
An RNA motif that binds ATP.
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pubmed:affiliation |
Department of Genetics, Harvard Medical School, Boston, Massachusetts.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.,
Research Support, Non-U.S. Gov't
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