rdf:type |
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lifeskim:mentions |
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pubmed:issue |
2
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pubmed:dateCreated |
1995-9-7
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pubmed:abstractText |
The structure of gamma delta resolvase complexed with a 34 bp substrate DNA has been determined at 3.0 A resolution. The DNA is sharply bent by 60 degrees toward the major groove and away from the resolvase catalytic domains at the recombination crossover point. The C-terminal one third of resolvase, which was disordered in the absence of DNA, forms an arm and a 3-helix DNA-binding domain on the opposite side of the DNA from the N-terminal domain. The arms wrap around the minor groove of the central 16 bp, and the DNA-binding domains interact with the major grooves near the outer boundaries of the binding site. The resolvase dimer is asymmetric, particularly in the arm region, implying a conformational adaptability that may be important for resolvase binding to different DNA sites in the synaptosome. It also raises the possibility of a sequential single-strand cleavage mechanism.
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pubmed:grant |
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Jul
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pubmed:issn |
0092-8674
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pubmed:author |
|
pubmed:issnType |
Print
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pubmed:day |
28
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pubmed:volume |
82
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
193-207
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pubmed:dateRevised |
2007-11-14
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pubmed:meshHeading |
pubmed-meshheading:7628011-Amino Acid Sequence,
pubmed-meshheading:7628011-Base Sequence,
pubmed-meshheading:7628011-Binding Sites,
pubmed-meshheading:7628011-Crystallography, X-Ray,
pubmed-meshheading:7628011-DNA, Superhelical,
pubmed-meshheading:7628011-DNA-Binding Proteins,
pubmed-meshheading:7628011-Macromolecular Substances,
pubmed-meshheading:7628011-Models, Molecular,
pubmed-meshheading:7628011-Molecular Sequence Data,
pubmed-meshheading:7628011-Nucleic Acid Conformation,
pubmed-meshheading:7628011-Nucleotidyltransferases,
pubmed-meshheading:7628011-Protein Conformation,
pubmed-meshheading:7628011-Protein Structure, Secondary,
pubmed-meshheading:7628011-Recombinant Proteins,
pubmed-meshheading:7628011-Sequence Homology, Amino Acid,
pubmed-meshheading:7628011-Transposases
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pubmed:year |
1995
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pubmed:articleTitle |
Crystal structure of the site-specific recombinase gamma delta resolvase complexed with a 34 bp cleavage site.
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pubmed:affiliation |
Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06520, USA.
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, U.S. Gov't, P.H.S.
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