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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
3
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pubmed:dateCreated |
1996-1-4
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pubmed:databankReference | |
pubmed:abstractText |
In virtually all vertebrate cells, Ro RNPs consist of the 60-kDa Ro autoantigen bound to one of several small cytoplasmic RNA molecules known as Y RNAs. Because the 60-kDa Ro autoantigen is also found complexed with defective precursors of 5S rRNA in Xenopus oocytes, we have proposed that this protein functions in a quality control, or discard pathway, for 5S RNA biosynthesis (O'Brien CA, Wolin SL, 1994, Genes & Dev 8:2891-2903). The role of the Y RNAs in this pathway is unknown. To begin a genetic analysis of Ro RNP function, we have characterized these particles in the nematode Caenorhabditis elegans. The C. elegans Ro protein is 12 kDa larger than the vertebrate protein; the larger size is due in part to an N-terminal extension and to two insertions in the RNA recognition motif. In contrast to all previously described vertebrate species, the Ro protein appears bound to a single Y RNA in C. elegans. Similar to vertebrate Y RNAs, the C. elegans Y RNA can be folded to form a pyrimidine-rich internal loop and a long stem in which the 5' and 3' ends are base paired. Within the stem is a conserved bulged helix that is proposed to be the binding site of the Ro protein. Interestingly, although the human protein can bind the nematode Y RNA, the C. elegans protein does not bind human Y RNAs. This is the first description of Ro RNPs in an invertebrate species.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Autoantigens,
http://linkedlifedata.com/resource/pubmed/chemical/RNA,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Small Cytoplasmic,
http://linkedlifedata.com/resource/pubmed/chemical/Ribonucleoproteins,
http://linkedlifedata.com/resource/pubmed/chemical/SS-A antigen,
http://linkedlifedata.com/resource/pubmed/chemical/TROVE2 protein, human
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pubmed:status |
MEDLINE
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pubmed:month |
May
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pubmed:issn |
1355-8382
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
1
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
293-303
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pubmed:dateRevised |
2008-11-20
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pubmed:meshHeading |
pubmed-meshheading:7489501-Amino Acid Sequence,
pubmed-meshheading:7489501-Animals,
pubmed-meshheading:7489501-Autoantigens,
pubmed-meshheading:7489501-Base Sequence,
pubmed-meshheading:7489501-Caenorhabditis elegans,
pubmed-meshheading:7489501-Humans,
pubmed-meshheading:7489501-Immunoblotting,
pubmed-meshheading:7489501-Molecular Sequence Data,
pubmed-meshheading:7489501-Nucleic Acid Conformation,
pubmed-meshheading:7489501-Precipitin Tests,
pubmed-meshheading:7489501-Protein Binding,
pubmed-meshheading:7489501-RNA,
pubmed-meshheading:7489501-RNA, Small Cytoplasmic,
pubmed-meshheading:7489501-Ribonucleoproteins,
pubmed-meshheading:7489501-Sequence Analysis, RNA,
pubmed-meshheading:7489501-Sequence Homology, Amino Acid
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pubmed:year |
1995
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pubmed:articleTitle |
Caenorhabditis elegans embryos contain only one major species of Ro RNP.
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pubmed:affiliation |
Department of Cell Biology, Yale University School of Medicine, New Haven, Connecticut 06510, USA.
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, U.S. Gov't, P.H.S.,
Research Support, Non-U.S. Gov't
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