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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
1981-12-21
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pubmed:abstractText |
A proton NMR study at 360 MHz and 500 MHz was carried out on the tetranucleoside triphosphate d(TAAT) at a temperature of 27 degrees C. Extensive decoupling experiments allowed a complete and unambiguous spectral assignment. The data are interpreted in terms of the N and S deoxyribose pseudorotational ranges. From the observed proton-proton coupling constants it is calculated that (a) the populations of deoxyribose S-form are as follows: dT(1)-, 85%; -dA(2)-, 97%; -dA(3)-, 81%; -dT(4), 64%; and (b) the g+ populations (backbone notation) along the exocyclic C4'-C5' bond in -dA(2)-, -dA(3)- and dT(4) are 82%, 86% and 78%, respectively. From these values, combined with chemical shift considerations, it is concluded that the central -dA(2)-dA(3)- part of the molecule occurs preferentially as a mixture of two right-handed single-helical conformations, denoted S-S and S-N, in a ratio of approximately 8 : 2. This situation closely mimics that found for the 3'-end of d(A-A-A) (Olsthoorn, C.S.M., Bostelaar, L.J., Van Boom, J. H. and Altona, C. (1980) Eur. J. Biochem 112, 95--110). Similarly, the conformational behavior of the dT(1)-dA(2)- and -dA(3)-dT(4) terminals appears roughly identical to that displayed by the corresponding dinucleoside monophosphates. The molecules as a whole does not show signs of cooperatively of stacking.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Adenine,
http://linkedlifedata.com/resource/pubmed/chemical/Deoxyribose,
http://linkedlifedata.com/resource/pubmed/chemical/Oligodeoxyribonucleotides,
http://linkedlifedata.com/resource/pubmed/chemical/Oligonucleotides,
http://linkedlifedata.com/resource/pubmed/chemical/Thymine
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pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
0006-3002
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
28
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pubmed:volume |
655
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
256-64
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:7284386-Adenine,
pubmed-meshheading:7284386-Deoxyribose,
pubmed-meshheading:7284386-Magnetic Resonance Spectroscopy,
pubmed-meshheading:7284386-Nucleic Acid Conformation,
pubmed-meshheading:7284386-Oligodeoxyribonucleotides,
pubmed-meshheading:7284386-Oligonucleotides,
pubmed-meshheading:7284386-Thymine
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pubmed:year |
1981
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pubmed:articleTitle |
Complete assignment and conformational analysis of a deoxyribotetranucleotide. d(TAAT). A 360 and 500 Mhz NMR study.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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