Switch to
Predicate | Object |
---|---|
rdf:type | |
lifeskim:mentions | |
pubmed:issue |
19
|
pubmed:dateCreated |
1983-12-20
|
pubmed:abstractText |
The structure of the complex between the serine protease Streptomyces griseus protease B (SGPB) and the third domain of the Kazal-type ovomucoid inhibitor from turkey has been solved at 1.8-A resolution and refined to a conventional R factor of 0.125. As others have reported previously for analogous complexes of proteases and protein inhibitors, the inhibitor binds in a fashion similar to that of a substrate; it is not cleaved, but there is a close approach (2.7 A) of the active site nucleophile Ser-195 O gamma to the carbonyl carbon of the reactive peptide bond of the inhibitor. Contrary to the structural reports regarding the other enzyme-inhibitor complexes, we conclude that there is no evidence for a significant distortion of this peptide bond from planarity. The mechanism of inhibition can be understood in terms of the equilibrium thermodynamic parameters Ka, the enzyme-inhibitor association constant, and Khyd, the equilibrium constant for inhibitor hydrolysis. These thermodynamic parameters can be rationalized in terms of the observed structure.
|
pubmed:language |
eng
|
pubmed:journal | |
pubmed:citationSubset |
IM
|
pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Endopeptidases,
http://linkedlifedata.com/resource/pubmed/chemical/Serine Endopeptidases,
http://linkedlifedata.com/resource/pubmed/chemical/Trypsin Inhibitor, Kazal Pancreatic,
http://linkedlifedata.com/resource/pubmed/chemical/Trypsin Inhibitors,
http://linkedlifedata.com/resource/pubmed/chemical/streptogrisin B
|
pubmed:status |
MEDLINE
|
pubmed:month |
Sep
|
pubmed:issn |
0006-2960
|
pubmed:author | |
pubmed:issnType |
Print
|
pubmed:day |
13
|
pubmed:volume |
22
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
4420-33
|
pubmed:dateRevised |
2006-11-15
|
pubmed:meshHeading |
pubmed-meshheading:6414511-Amino Acid Sequence,
pubmed-meshheading:6414511-Animals,
pubmed-meshheading:6414511-Binding Sites,
pubmed-meshheading:6414511-Endopeptidases,
pubmed-meshheading:6414511-Hydrogen Bonding,
pubmed-meshheading:6414511-Models, Molecular,
pubmed-meshheading:6414511-Protein Binding,
pubmed-meshheading:6414511-Protein Conformation,
pubmed-meshheading:6414511-Serine Endopeptidases,
pubmed-meshheading:6414511-Streptomyces griseus,
pubmed-meshheading:6414511-Trypsin Inhibitor, Kazal Pancreatic,
pubmed-meshheading:6414511-Trypsin Inhibitors,
pubmed-meshheading:6414511-Turkeys,
pubmed-meshheading:6414511-X-Ray Diffraction
|
pubmed:year |
1983
|
pubmed:articleTitle |
Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution.
|
pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
|