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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
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pubmed:dateCreated |
1984-2-24
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pubmed:abstractText |
Evolutionary studies on the tubulin multigene families were initiated by nucleotide sequence analysis of cDNA clones complementary to sea urchin (Lytechinus pictus) testis alpha- and beta-tubulin cDNA clones (p beta 1, p beta 2, p beta e) demonstrated the existence of tubulin mRNA heterogeneity. p beta 2 and p beta 3 contain identical tubulin-coding regions and extremely similar 3' untranslated sequences, including a polyadenylation signal (AAUAAA). However, p beta 2 contains an additional region of 3' untranslated sequence which includes a second polyadenylation signal. These two sequences may be allelic, representing products of alternative transcription termination or processing pathways. p beta 1 and p beta 2 (or p beta 3) cDNAs almost certainly correspond to transcripts of distinct but evolutionarily related genes. Examination of the available coding portions showed that they differ only by a few silent nucleotide substitutions and the deletion/insertion of one codon; most of the differences are clustered within the last 15 3'-end codons. In contrast, their 3' untranslated sequences are considerably divergent. Nucleotide alignment in this region was feasible by considering specific point and segmental mutations, mainly T in equilibrium or formed from C transitions and small deletions/insertions associated with small direct repeats. The sea urchin alpha- and beta-tubulin cDNA and corresponding protein sequences were compared with previously described tubulin cDNA and protein sequences from other organisms. Both alpha and beta tubulins are very conserved proteins, evolving with a rate comparable to that of histones. Analysis of the nucleotide divergence of the coding cDNA regions showed that replacement sites have changed with a rate 20-175 times lower than that of the silent sites. Among the 177 codons compared between the sea urchin testis and chick brain beta-tubulin cDNAs, there are 7 conservative amino acid replacements and the deletion/insertion of two codons. Most of these changes are clustered near the C-terminus. The 161-amino acid portion of chick brain, rat and porcine alpha-tubulin sequences differs by 3 conservative amino acid replacements from the corresponding sea urchin testis alpha-tubulin sequence. The compared interspecies 3' untranslated sequences are very divergent.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:issn |
0022-2844
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
19
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
397-410
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pubmed:dateRevised |
2010-11-18
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pubmed:meshHeading |
pubmed-meshheading:6317873-Amino Acid Sequence,
pubmed-meshheading:6317873-Animals,
pubmed-meshheading:6317873-Base Sequence,
pubmed-meshheading:6317873-Biological Evolution,
pubmed-meshheading:6317873-Cloning, Molecular,
pubmed-meshheading:6317873-DNA,
pubmed-meshheading:6317873-DNA Restriction Enzymes,
pubmed-meshheading:6317873-Genes,
pubmed-meshheading:6317873-Plasmids,
pubmed-meshheading:6317873-RNA, Messenger,
pubmed-meshheading:6317873-Sea Urchins,
pubmed-meshheading:6317873-Tubulin
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pubmed:year |
1983
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pubmed:articleTitle |
Evolution of alpha q- and beta-tubulin genes as inferred by the nucleotide sequences of sea urchin cDNA clones.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.
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