rdf:type |
|
lifeskim:mentions |
umls-concept:C0020923,
umls-concept:C0028606,
umls-concept:C0028954,
umls-concept:C0064884,
umls-concept:C0599844,
umls-concept:C0851827,
umls-concept:C0870432,
umls-concept:C1148673,
umls-concept:C1519249,
umls-concept:C1555465,
umls-concept:C1701901,
umls-concept:C1705417,
umls-concept:C2349975
|
pubmed:issue |
18
|
pubmed:dateCreated |
1988-1-20
|
pubmed:abstractText |
A series of monocationic lexitropsins, or information-reading oligopeptides, were synthesized to minimize and offset the AT bias for doubly cationic ligands bound in the minor groove of DNA. The compounds possess an N-formyl group in place of the guanidinium moiety normally present in netropsin. By systematic replacement of the N-methylpyrrole groups of the dipeptide with N-methylimidazole, a remarkably high degree of sequence specificity was obtained. One of the compounds having two N-methylimidazole residues was found to exhibit dramatically altered specificity when compared with netropsin and preferred to bind to the sequence 5'-CCGT-3' 3'-GGCA-5'. The structural elements underlying sequence recognition in terms of the model for the netropsin-DNA interaction are presented and discussed.
|
pubmed:grant |
|
pubmed:language |
eng
|
pubmed:journal |
|
pubmed:citationSubset |
IM
|
pubmed:chemical |
|
pubmed:status |
MEDLINE
|
pubmed:month |
Sep
|
pubmed:issn |
0006-2960
|
pubmed:author |
|
pubmed:issnType |
Print
|
pubmed:day |
8
|
pubmed:volume |
26
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
5590-5
|
pubmed:dateRevised |
2007-11-14
|
pubmed:meshHeading |
pubmed-meshheading:2823885-Base Sequence,
pubmed-meshheading:2823885-DNA,
pubmed-meshheading:2823885-Deoxyribonuclease I,
pubmed-meshheading:2823885-Guanidines,
pubmed-meshheading:2823885-Imidazoles,
pubmed-meshheading:2823885-Indicators and Reagents,
pubmed-meshheading:2823885-Magnetic Resonance Spectroscopy,
pubmed-meshheading:2823885-Mass Spectrometry,
pubmed-meshheading:2823885-Netropsin,
pubmed-meshheading:2823885-Oligopeptides,
pubmed-meshheading:2823885-Structure-Activity Relationship
|
pubmed:year |
1987
|
pubmed:articleTitle |
Molecular recognition between oligopeptides and nucleic acids. Monocationic imidazole lexitropsins that display enhanced GC sequence dependent DNA binding.
|
pubmed:affiliation |
Department of Chemistry, Syracuse University, New York 13244-1200.
|
pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.,
Research Support, Non-U.S. Gov't
|