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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
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pubmed:dateCreated |
1990-3-6
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pubmed:abstractText |
Genetic variability in human immunodeficiency virus type 1 (HIV-1) has been studied extensively, but the total nucleotide sequence of the HIV-2 genome has been reported only in two strains. For phylogenetic analyses of HIV, the genetic variability of HIV-2 should be investigated. This paper reports the complete nucleotide sequence of an HIV-2 isolate from Ghana, HIV-2[GH-1]. This virus showed approximately 85% homology in overall nucleotide sequence with HIV-2ROD. The amino acid sequence of the gag and pol proteins of HIV-2[GH-1] showed 90% homology with those of HIV-2ROD, but its env gene and central regions were highly variable (more than 20% divergence in amino acids), indicating the presence of extensive genetic heterogeneity in HIV-2. However, the sequences with specific functions were relatively well conserved in these HIV-2 isolates.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
|
pubmed:month |
Dec
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pubmed:issn |
0889-2229
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
5
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
593-604
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pubmed:dateRevised |
2008-11-21
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pubmed:meshHeading |
pubmed-meshheading:2611042-Amino Acid Sequence,
pubmed-meshheading:2611042-Base Sequence,
pubmed-meshheading:2611042-DNA, Viral,
pubmed-meshheading:2611042-Genes, Viral,
pubmed-meshheading:2611042-Genetic Variation,
pubmed-meshheading:2611042-Ghana,
pubmed-meshheading:2611042-HIV-1,
pubmed-meshheading:2611042-HIV-2,
pubmed-meshheading:2611042-Humans,
pubmed-meshheading:2611042-Molecular Sequence Data,
pubmed-meshheading:2611042-Restriction Mapping,
pubmed-meshheading:2611042-Sequence Homology, Nucleic Acid,
pubmed-meshheading:2611042-Simian immunodeficiency virus
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pubmed:year |
1989
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pubmed:articleTitle |
Genomic divergence of HIV-2 from Ghana.
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pubmed:affiliation |
Fundamental Research Laboratory, Saitama, Japan.
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pubmed:publicationType |
Journal Article,
Comparative Study
|