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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
1990-3-1
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pubmed:abstractText |
A method for distinguishing between membrane and soluble proteins in an amino acid sequence was developed, using only two parameters associated with the hydrophobicity: the average hydrophobicity and the power spectral density of period longer than 30 residues. The power spectral density was calculated by a maximum entropy method of Fourier transformation. Membrane proteins could be distinguished from soluble proteins with a distinction rate as high as 97%. This fact strongly suggests that the morphology of proteins, i.e., membrane or soluble forms, is determined thermodynamically through the hydrophobicity of polypeptides.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
0301-4622
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
15
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pubmed:volume |
34
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
69-77
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pubmed:dateRevised |
2008-11-21
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pubmed:meshHeading |
pubmed-meshheading:2558737-Amino Acid Sequence,
pubmed-meshheading:2558737-Animals,
pubmed-meshheading:2558737-Cattle,
pubmed-meshheading:2558737-Chemistry, Physical,
pubmed-meshheading:2558737-Chickens,
pubmed-meshheading:2558737-Cytochrome c Group,
pubmed-meshheading:2558737-Fourier Analysis,
pubmed-meshheading:2558737-Humans,
pubmed-meshheading:2558737-Membrane Proteins,
pubmed-meshheading:2558737-Methods,
pubmed-meshheading:2558737-Physicochemical Phenomena,
pubmed-meshheading:2558737-Protein Conformation,
pubmed-meshheading:2558737-Proteins,
pubmed-meshheading:2558737-Solubility,
pubmed-meshheading:2558737-Thermodynamics
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pubmed:year |
1989
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pubmed:articleTitle |
A theoretical method for distinguishing between soluble and membrane proteins.
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pubmed:affiliation |
Department of Material Systems Engineering, Faculty of Technology, Tokyo University of Agriculture and Technology, Japan.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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