Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
1989-3-21
pubmed:abstractText
Leukocyte adhesion deficiency (LAD) is a heritable deficiency of the LFA-1, Mac-1, p150,95 family of leukocyte alpha beta heterodimers (the leukocyte integrins). We have studied the defect in patients who synthesize an aberrantly small form of the beta subunit common to all three proteins. S1 nuclease protection showed the presence of a 90-nucleotide mismatch in RNA from patients and relatives, correlating with inheritance of the disease. Use of the Taq polymerase chain reaction to amplify this region of RNA after first strand cDNA synthesis and sequencing showed an in-frame deletion of 90 nucleotides in the extracellular domain. Thus, this highly conserved region, 63% and 53% identical in amino acid sequence to two other beta subunits of the integrin family, is required for association of the beta subunit with alpha subunits. The 90-nucleotide region corresponds to a single exon present in both the normal and patient genome. The patient DNA has a single G to C substitution in the 5' splice site. This results in the direct joining of nonconsecutive exons in an unusual type of abnormal RNA splicing. A small amount of normally spliced message, detected by S1 nuclease protection and Taq polymerase chain reaction, encodes a normal sized beta subunit which is surface-expressed and accounts for the low levels of leukocyte integrin expression observed in these patients, and hence the moderate phenotype.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0021-9258
pubmed:author
pubmed:issnType
Print
pubmed:day
25
pubmed:volume
264
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3588-95
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed-meshheading:2464599-Amino Acid Sequence, pubmed-meshheading:2464599-Base Sequence, pubmed-meshheading:2464599-DNA, pubmed-meshheading:2464599-DNA Probes, pubmed-meshheading:2464599-DNA-Directed DNA Polymerase, pubmed-meshheading:2464599-Endonucleases, pubmed-meshheading:2464599-Exons, pubmed-meshheading:2464599-Humans, pubmed-meshheading:2464599-Integrins, pubmed-meshheading:2464599-Introns, pubmed-meshheading:2464599-Macromolecular Substances, pubmed-meshheading:2464599-Male, pubmed-meshheading:2464599-Membrane Glycoproteins, pubmed-meshheading:2464599-Molecular Sequence Data, pubmed-meshheading:2464599-Mutation, pubmed-meshheading:2464599-Phenotype, pubmed-meshheading:2464599-Protein Precursors, pubmed-meshheading:2464599-RNA, pubmed-meshheading:2464599-RNA, Messenger, pubmed-meshheading:2464599-RNA Splicing, pubmed-meshheading:2464599-Single-Strand Specific DNA and RNA Endonucleases
pubmed:year
1989
pubmed:articleTitle
Leukocyte adhesion deficiency. Aberrant splicing of a conserved integrin sequence causes a moderate deficiency phenotype.
pubmed:affiliation
Department of Pathology, Harvard Medical School, Boston, Massachusetts 02115.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't