Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
2011-6-24
pubmed:abstractText
To measure the interactions of diacylglycerol acyltransferase (DGAT) by surface plasmon resonance (SPR), we immobilized Saccharomyces cerevisiae DGAT2 encoded by DGA1 on a BIACORE sensor chip surface. We used N-terminally truncated Dga1p with a FLAG tag at the C-terminus, which was purified to apparent homogeneity, maintaining significant DGAT activity (Kamisaka et al., Appl. Microbiol. Biotechnol., 88, 105-115 (2010)). Truncated Dga1p with a FLAG tag was immobilized with an anti-FLAG antibody that had been coupled with an L1 chip surface consisting of a carboxymethyl dextran matrix with additional hydrophobic alkane groups. The Dga1p-immobilized chip surface was analyzed for interactions of Dga1p with oleoyl-CoA, its substrate, and anti-Dga1p IgG, its interacting protein, by SPR. The binding of these analytes with the Dga1p-immobilized chip surface was specific, because butyryl-CoA, which cannot be used as a substrate for DGAT, and anti-glyceraldehyde-3-phosphate dehydrogenase IgG, did not induce any signals on SPR. Furthermore, injection of organic compounds such as xanthohumol, a DGAT inhibitor, into the Dga1p-immobilized chip surface induced significant SPR signals, probably due to interaction with DGAT. Another DGAT inhibitor, piperine, did not induce SPR signals on application, but induced them due to piperine on application together with oleoyl-CoA, in which piperine can be incorporated into the micelles of oleoyl-CoA. The results indicate that the Dga1p-immobilized L1 chip surface recognized DGAT inhibitors. Taking all this together, SPR measurement using the Dga1p-immobilized L1 chip surface provided a useful system to elucidate the structure-function relationships of DGAT and screen DGAT inhibitors.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Acyl Coenzyme A, http://linkedlifedata.com/resource/pubmed/chemical/Alkaloids, http://linkedlifedata.com/resource/pubmed/chemical/Alkanes, http://linkedlifedata.com/resource/pubmed/chemical/Antibodies, http://linkedlifedata.com/resource/pubmed/chemical/Benzodioxoles, http://linkedlifedata.com/resource/pubmed/chemical/Dextrans, http://linkedlifedata.com/resource/pubmed/chemical/Diacylglycerol O-Acyltransferase, http://linkedlifedata.com/resource/pubmed/chemical/Enzyme Inhibitors, http://linkedlifedata.com/resource/pubmed/chemical/Enzymes, Immobilized, http://linkedlifedata.com/resource/pubmed/chemical/FLAG peptide, http://linkedlifedata.com/resource/pubmed/chemical/Flavonoids, http://linkedlifedata.com/resource/pubmed/chemical/Peptides, http://linkedlifedata.com/resource/pubmed/chemical/Piperidines, http://linkedlifedata.com/resource/pubmed/chemical/Polyunsaturated Alkamides, http://linkedlifedata.com/resource/pubmed/chemical/Propiophenones, http://linkedlifedata.com/resource/pubmed/chemical/butyryl-coenzyme A, http://linkedlifedata.com/resource/pubmed/chemical/carboxymethyl dextran, http://linkedlifedata.com/resource/pubmed/chemical/oleoyl-coenzyme A, http://linkedlifedata.com/resource/pubmed/chemical/piperine, http://linkedlifedata.com/resource/pubmed/chemical/xanthohumol
pubmed:status
MEDLINE
pubmed:issn
1347-6947
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
75
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1135-9
pubmed:meshHeading
pubmed-meshheading:21670529-Acyl Coenzyme A, pubmed-meshheading:21670529-Alkaloids, pubmed-meshheading:21670529-Alkanes, pubmed-meshheading:21670529-Antibodies, pubmed-meshheading:21670529-Benzodioxoles, pubmed-meshheading:21670529-Dextrans, pubmed-meshheading:21670529-Diacylglycerol O-Acyltransferase, pubmed-meshheading:21670529-Enzyme Inhibitors, pubmed-meshheading:21670529-Enzymes, Immobilized, pubmed-meshheading:21670529-Flavonoids, pubmed-meshheading:21670529-High-Throughput Screening Assays, pubmed-meshheading:21670529-Lab-On-A-Chip Devices, pubmed-meshheading:21670529-Peptides, pubmed-meshheading:21670529-Piperidines, pubmed-meshheading:21670529-Polyunsaturated Alkamides, pubmed-meshheading:21670529-Propiophenones, pubmed-meshheading:21670529-Protein Binding, pubmed-meshheading:21670529-Saccharomyces cerevisiae, pubmed-meshheading:21670529-Structure-Activity Relationship, pubmed-meshheading:21670529-Substrate Specificity, pubmed-meshheading:21670529-Surface Plasmon Resonance
pubmed:year
2011
pubmed:articleTitle
Surface plasmon resonance analysis of interactions between diacylglycerol acyltransferase and its interacting molecules.
pubmed:affiliation
National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan. kamisaka.y@aist.go.jp
pubmed:publicationType
Journal Article