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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2011-5-2
pubmed:abstractText
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an essential role in glycolysis by catalyzing the conversion of D-glyceraldehyde 3-phosphate (D-G3P) to 1,3-diphosphoglycerate using NAD(+) as a cofactor. In this report, the GAPDH gene from the hyperthermophilic archaeon Thermococcus kodakarensis KOD1 (GAPDH-tk) was cloned and the protein was purified to homogeneity. GAPDH-tk exists as a homotetramer with a native molecular mass of 145 kDa; the subunit molecular mass was 37 kDa. GAPDH-tk is a thermostable protein with a half-life of 5 h at 80-90°C. The apparent K (m) values for NAD(+) and D-G3P were 77.8 ± 7.5 ?M and 49.3 ± 3.0 ?M, respectively, with V (max) values of 45.1 ± 0.8 U/mg and 59.6 ± 1.3 U/mg, respectively. Transmission electron microscopy (TEM) and image processing confirmed that GAPDH-tk has a tetrameric structure. Interestingly, GAPDH-tk migrates as high molecular mass forms (~232 kDa and ~669 kDa) in response to oxidative stress.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
1433-4909
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
15
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
337-46
pubmed:meshHeading
pubmed-meshheading:21409597-Amino Acid Sequence, pubmed-meshheading:21409597-Archaeal Proteins, pubmed-meshheading:21409597-Catalytic Domain, pubmed-meshheading:21409597-Cloning, Molecular, pubmed-meshheading:21409597-Diphosphoglyceric Acids, pubmed-meshheading:21409597-Enzyme Stability, pubmed-meshheading:21409597-Glyceraldehyde 3-Phosphate, pubmed-meshheading:21409597-Glyceraldehyde-3-Phosphate Dehydrogenases, pubmed-meshheading:21409597-Half-Life, pubmed-meshheading:21409597-Hot Temperature, pubmed-meshheading:21409597-Kinetics, pubmed-meshheading:21409597-Microscopy, Electron, Transmission, pubmed-meshheading:21409597-Molecular Sequence Data, pubmed-meshheading:21409597-Molecular Weight, pubmed-meshheading:21409597-Mutation, pubmed-meshheading:21409597-NAD, pubmed-meshheading:21409597-Oxidative Stress, pubmed-meshheading:21409597-Protein Structure, Quaternary, pubmed-meshheading:21409597-Structure-Activity Relationship, pubmed-meshheading:21409597-Thermococcus
pubmed:year
2011
pubmed:articleTitle
Biochemical characterization of glyceraldehyde-3-phosphate dehydrogenase from Thermococcus kodakarensis KOD1.
pubmed:affiliation
College of Plant Sciences, Jilin University, Changchun, 130-062, China.
pubmed:publicationType
Journal Article