Source:http://linkedlifedata.com/resource/pubmed/id/21388199
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
12
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pubmed:dateCreated |
2011-3-23
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pubmed:abstractText |
The de novo design of protein-binding peptides is challenging because it requires the identification of both a sequence and a backbone conformation favorable for binding. We used a computational strategy that iterates between structure and sequence optimization to redesign the C-terminal portion of the RGS14 GoLoco motif peptide so that it adopts a new conformation when bound to G?(i1). An X-ray crystal structure of the redesigned complex closely matches the computational model, with a backbone root-mean-square deviation of 1.1 Å.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Mar
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pubmed:issn |
1520-5126
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
30
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pubmed:volume |
133
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
4190-2
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pubmed:meshHeading |
pubmed-meshheading:21388199-Computational Biology,
pubmed-meshheading:21388199-Computer Simulation,
pubmed-meshheading:21388199-Crystallography, X-Ray,
pubmed-meshheading:21388199-GTP-Binding Protein alpha Subunits, Gi-Go,
pubmed-meshheading:21388199-Models, Molecular,
pubmed-meshheading:21388199-Molecular Dynamics Simulation,
pubmed-meshheading:21388199-Peptides,
pubmed-meshheading:21388199-Protein Conformation
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pubmed:year |
2011
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pubmed:articleTitle |
Computational design of the sequence and structure of a protein-binding peptide.
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pubmed:affiliation |
Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, North Carolina 27599-7260, USA.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't,
Research Support, N.I.H., Extramural
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