Source:http://linkedlifedata.com/resource/pubmed/id/21382373
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
7
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pubmed:dateCreated |
2011-4-4
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pubmed:abstractText |
The transcription and replication of the severe acute respiratory syndrome (SARS) coronavirus (SARS-CoV) is regulated by specific viral genome sequences within 5'- and 3'-untranslated regions (5'-UTR and 3'-UTR). Here we report the solution structure of 5'-UTR derived stem-loop 2 (SL2) of SARS-CoV determined by NMR spectroscopy. The highly conserved pentaloop of SL2 is stacked on 5-bp stem and adopts a canonical CUYG tetraloop fold with the 3' nucleotide (U51) flipped out of the stack. The significance of this structure in the context of a previous mutagenesis analysis of SL2 function in replication of the related group 2 coronavirus, mouse hepatitis virus, is discussed.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Apr
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pubmed:issn |
1873-3468
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pubmed:author | |
pubmed:copyrightInfo |
Copyright © 2011 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
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pubmed:issnType |
Electronic
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pubmed:day |
6
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pubmed:volume |
585
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
1049-53
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pubmed:dateRevised |
2011-11-4
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pubmed:meshHeading |
pubmed-meshheading:21382373-5' Untranslated Regions,
pubmed-meshheading:21382373-Base Pairing,
pubmed-meshheading:21382373-Base Sequence,
pubmed-meshheading:21382373-Conserved Sequence,
pubmed-meshheading:21382373-Inverted Repeat Sequences,
pubmed-meshheading:21382373-Magnetic Resonance Spectroscopy,
pubmed-meshheading:21382373-Models, Molecular,
pubmed-meshheading:21382373-Molecular Sequence Data,
pubmed-meshheading:21382373-RNA, Viral,
pubmed-meshheading:21382373-SARS Virus,
pubmed-meshheading:21382373-Solutions,
pubmed-meshheading:21382373-Structure-Activity Relationship
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pubmed:year |
2011
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pubmed:articleTitle |
The solution structure of coronaviral stem-loop 2 (SL2) reveals a canonical CUYG tetraloop fold.
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pubmed:affiliation |
Department of Chemistry, Indiana University, Bloomington, IN 47405, USA.
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pubmed:publicationType |
Journal Article,
Research Support, N.I.H., Extramural
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