Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
15
pubmed:dateCreated
2011-4-15
pubmed:abstractText
Forced expression of the transcription factor HoxB4 has been shown to enhance the self-renewal capacity of mouse bone marrow hematopoietic stem cells (HSCs) and confer a long-term repopulating capacity to yolk sac and embryonic stem (ES) cell-derived hematopoietic precursors. The fact that ES cell-derived precursors do not repopulate bone marrow without HoxB4 underscores an important role for HoxB4 in the maturation of ES-derived hematopoietic precursors into long-term repopulating HSCs. However, the precise molecular mechanism underlying this process is barely understood. In this study, we performed a genome-wide analysis of HoxB4 using ES cell-derived hematopoietic stem/progenitor cells. The results revealed many of the genes essential for HSC development to be direct targets of HoxB4, such as Runx1, Scl/Tal1, Gata2, and Gfi1. The expression profiling also showed that HoxB4 indirectly affects the expression of several important genes, such as Lmo2, Erg, Meis1, Pbx1, Nov, AhR, and Hemgn. HoxB4 tended to activate the transcription, but the down-regulation of a significant portion of direct targets suggested its function to be context-dependent. These findings indicate that HoxB4 reprograms a set of key regulator genes to facilitate the maturation of developing HSCs into repopulating cells. Our list of HoxB4 targets also provides novel candidate regulators for HSCs.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
AIM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Basic Helix-Loop-Helix..., http://linkedlifedata.com/resource/pubmed/chemical/Core Binding Factor Alpha 2 Subunit, http://linkedlifedata.com/resource/pubmed/chemical/DNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/GATA2 Transcription Factor, http://linkedlifedata.com/resource/pubmed/chemical/Gata2 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Gfi1 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Homeodomain Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Hoxb4 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Proto-Oncogene Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Runx1 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Tal1 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors
pubmed:status
MEDLINE
pubmed:month
Apr
pubmed:issn
1528-0020
pubmed:author
pubmed:issnType
Electronic
pubmed:day
14
pubmed:volume
117
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
e142-50
pubmed:meshHeading
pubmed-meshheading:21343615-Animals, pubmed-meshheading:21343615-Basic Helix-Loop-Helix Transcription Factors, pubmed-meshheading:21343615-Cell Line, pubmed-meshheading:21343615-Core Binding Factor Alpha 2 Subunit, pubmed-meshheading:21343615-DNA-Binding Proteins, pubmed-meshheading:21343615-Databases, Genetic, pubmed-meshheading:21343615-Embryonic Stem Cells, pubmed-meshheading:21343615-GATA2 Transcription Factor, pubmed-meshheading:21343615-Gene Expression Regulation, Developmental, pubmed-meshheading:21343615-Genome-Wide Association Study, pubmed-meshheading:21343615-Hematopoietic Stem Cells, pubmed-meshheading:21343615-Homeodomain Proteins, pubmed-meshheading:21343615-Mice, pubmed-meshheading:21343615-Oligonucleotide Array Sequence Analysis, pubmed-meshheading:21343615-Proto-Oncogene Proteins, pubmed-meshheading:21343615-Transcription Factors
pubmed:year
2011
pubmed:articleTitle
Genome-wide analysis of target genes regulated by HoxB4 in hematopoietic stem and progenitor cells developing from embryonic stem cells.
pubmed:affiliation
Department of Cellular and Molecular Medicine, Graduate School of Medicine, Chiba University, Chiba, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural