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rdf:type |
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lifeskim:mentions |
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pubmed:issue |
6
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pubmed:dateCreated |
2010-12-14
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pubmed:databankReference |
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462219,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462220,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462221,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462222,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462223,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462224,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462225,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462226,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462227,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462228,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462229,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462230,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462231,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462232,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462233,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462234,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462235,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462236,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462237,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462238,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462239,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/HM462240
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pubmed:abstractText |
The nucleotide sequence of the HN gene was determined for 21 isolates of avian paramyxovirus type 2 virus and compared with the published HN gene of APMV-2/chicken/California/Yucaipa/56. The HN gene of the 22 viruses had five different lengths in the range of 1737 to 1755 nucleotides coding for 579 to 585 amino acids. Phylogenetic analysis of a corresponding 1734-nucleotide sequence from the HN gene of each virus established five genetic groups (I to V), two of which (II and IV) could be divided into two sub-groups (IIa and IIb; and IVa and IVb). Although there were some exceptions, generally isolates placed in the same genetic group had >80% similarity in nucleotide sequence and <80% with the other isolates; while those in the same sub-group had >90% nucleotide sequence similarity.
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Dec
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pubmed:issn |
1465-3338
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pubmed:author |
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pubmed:issnType |
Electronic
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pubmed:volume |
39
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
453-8
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pubmed:meshHeading |
pubmed-meshheading:21154054-Amino Acid Sequence,
pubmed-meshheading:21154054-Animals,
pubmed-meshheading:21154054-Avulavirus,
pubmed-meshheading:21154054-Avulavirus Infections,
pubmed-meshheading:21154054-Base Sequence,
pubmed-meshheading:21154054-Bird Diseases,
pubmed-meshheading:21154054-Birds,
pubmed-meshheading:21154054-Genetic Heterogeneity,
pubmed-meshheading:21154054-Hemagglutinins, Viral,
pubmed-meshheading:21154054-Molecular Sequence Data,
pubmed-meshheading:21154054-Neuraminidase,
pubmed-meshheading:21154054-Phylogeny,
pubmed-meshheading:21154054-Polymerase Chain Reaction
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pubmed:year |
2010
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pubmed:articleTitle |
Phylogenetic analysis of the nucleotide sequences for the HN gene of 22 avian paramyxovirus type 2 viruses reveals marked heterogeneity.
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pubmed:affiliation |
Virology Department, Veterinary Laboratories Agency-Weybridge, New Haw, Addlestone, UK.
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pubmed:publicationType |
Journal Article
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