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rdf:type |
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lifeskim:mentions |
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pubmed:issue |
11
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pubmed:dateCreated |
2010-11-18
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pubmed:abstractText |
Although transcription in mammalian genomes can initiate from various genomic positions (e.g., 3'UTR, coding exons, etc.), most locations on genomes are not prone to transcription initiation. It is of practical and theoretical interest to be able to estimate such collections of non-TSS locations (NTLs). The identification of large portions of NTLs can contribute to better focusing the search for TSS locations and thus contribute to promoter and gene finding. It can help in the assessment of 5' completeness of expressed sequences, contribute to more successful experimental designs, as well as more accurate gene annotation.
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:issn |
1932-6203
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pubmed:author |
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pubmed:issnType |
Electronic
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pubmed:volume |
5
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
e13934
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pubmed:meshHeading |
pubmed-meshheading:21085627-Algorithms,
pubmed-meshheading:21085627-Animals,
pubmed-meshheading:21085627-Base Sequence,
pubmed-meshheading:21085627-Chromosomes, Human, Pair 21,
pubmed-meshheading:21085627-Chromosomes, Human, Pair 22,
pubmed-meshheading:21085627-Chromosomes, Human, Pair 4,
pubmed-meshheading:21085627-Computational Biology,
pubmed-meshheading:21085627-Genome,
pubmed-meshheading:21085627-Genome, Human,
pubmed-meshheading:21085627-Humans,
pubmed-meshheading:21085627-Internet,
pubmed-meshheading:21085627-Mice,
pubmed-meshheading:21085627-Molecular Sequence Data,
pubmed-meshheading:21085627-Promoter Regions, Genetic,
pubmed-meshheading:21085627-Receptors, Opioid, mu,
pubmed-meshheading:21085627-Reproducibility of Results,
pubmed-meshheading:21085627-Transcription, Genetic,
pubmed-meshheading:21085627-Transcription Initiation Site
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pubmed:year |
2010
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pubmed:articleTitle |
High sensitivity TSS prediction: estimates of locations where TSS cannot occur.
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pubmed:affiliation |
Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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