Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
4
pubmed:dateCreated
2010-9-15
pubmed:abstractText
Narcolepsy is a sleep disorder characterized by excessive daytime sleepiness, cataplexy, and a pathological manifestation of rapid eye movement during sleep. Narcoleptic pathogenesis is triggered by both genetic and environmental factors. Recently, development of genome-wide association studies (GWAS) has identified new genetic factors, with many more susceptibility genes yet to be elucidated. Using a new approach that consists of a combination of GWAS and an extensive database search for candidate genes, we picked up 202 candidate genes and performed a replication study in 222 narcoleptic patients and 380 controls. Statistical analysis indicated that six genes, NFATC2, SCP2, CACNA1C, TCRA, POLE, and FAM3D, were associated with narcolepsy (P<0.001). Some of these associations were further supported by gene expression analyses and an association study in essential hypersomnia (EHS), CNS hypersonia similar to narcolepsy. This novel approach will be applicable to other GWAS in the search of disease-related susceptibility genes.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/CACNA1C protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Calcium Channels, L-Type, http://linkedlifedata.com/resource/pubmed/chemical/Carrier Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Cytokines, http://linkedlifedata.com/resource/pubmed/chemical/DNA Polymerase II, http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQ Antigens, http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQ beta-Chains, http://linkedlifedata.com/resource/pubmed/chemical/HLA-DQB1 antigen, http://linkedlifedata.com/resource/pubmed/chemical/HLA-DR Antigens, http://linkedlifedata.com/resource/pubmed/chemical/HLA-DRB1*15:01 antigen, http://linkedlifedata.com/resource/pubmed/chemical/HLA-DRB1 Chains, http://linkedlifedata.com/resource/pubmed/chemical/Membrane Glycoproteins, http://linkedlifedata.com/resource/pubmed/chemical/NFATC Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/NFATC2 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/POLE protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Receptors, Antigen, T-Cell..., http://linkedlifedata.com/resource/pubmed/chemical/sterol carrier proteins
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
1432-1203
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
128
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
433-41
pubmed:dateRevised
2011-11-17
pubmed:meshHeading
pubmed-meshheading:20677014-Calcium Channels, L-Type, pubmed-meshheading:20677014-Carrier Proteins, pubmed-meshheading:20677014-Chi-Square Distribution, pubmed-meshheading:20677014-Cytokines, pubmed-meshheading:20677014-DNA Polymerase II, pubmed-meshheading:20677014-Gene Expression Profiling, pubmed-meshheading:20677014-Gene Frequency, pubmed-meshheading:20677014-Genetic Predisposition to Disease, pubmed-meshheading:20677014-Genome-Wide Association Study, pubmed-meshheading:20677014-Genotype, pubmed-meshheading:20677014-HLA-DQ Antigens, pubmed-meshheading:20677014-HLA-DQ beta-Chains, pubmed-meshheading:20677014-HLA-DR Antigens, pubmed-meshheading:20677014-HLA-DRB1 Chains, pubmed-meshheading:20677014-Humans, pubmed-meshheading:20677014-Linkage Disequilibrium, pubmed-meshheading:20677014-Membrane Glycoproteins, pubmed-meshheading:20677014-NFATC Transcription Factors, pubmed-meshheading:20677014-Narcolepsy, pubmed-meshheading:20677014-Polymorphism, Single Nucleotide, pubmed-meshheading:20677014-Receptors, Antigen, T-Cell, alpha-beta, pubmed-meshheading:20677014-Reverse Transcriptase Polymerase Chain Reaction
pubmed:year
2010
pubmed:articleTitle
An approach based on a genome-wide association study reveals candidate loci for narcolepsy.
pubmed:affiliation
Department of Human Genetics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't