Source:http://linkedlifedata.com/resource/pubmed/id/20601490
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| Predicate | Object |
|---|---|
| rdf:type | |
| lifeskim:mentions | |
| pubmed:issue |
Pt 6
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| pubmed:dateCreated |
2011-6-7
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| pubmed:databankReference | |
| pubmed:abstractText |
A bacterial strain, designated an-8(T), was isolated from a freshwater shrimp culture pond in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain an-8(T) were Gram-reaction-negative, aerobic, rod-shaped and non-motile, formed yellow-pigmented colonies and grew at 15-30 °C (optimum 25 °C), pH 7-8 (optimum pH 8.0) and in 0-1 % (w/v) NaCl (optimum 0 %). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain an-8(T) belonged to the genus Flavobacterium and its most closely related neighbours were Flavobacterium terrigena DS-20(T) and Flavobacterium terrae R2A1-13(T) with sequence similarities of 95.1 and 94.9 %, respectively. Strain an-8(T) contained iso-C(15 : 0), summed feature 3 (C(16 : 1)?6c and/or C(16 : 1)?7c), iso-C(16 : 0) 3-OH, iso-C(15 : 0) 3-OH, iso-C(17 : 0) 3-OH and iso-C(15 : 1) as the major fatty acids. The major isoprenoid quinone was MK-6. The polar lipid profile consisted of a mixture of phosphatidylethanolamine, phosphatidyldimethylethanolamine, phosphatidylserine and several unidentified polar lipids. The G+C content of the genomic DNA was 39.8 mol%. On the basis of the phylogenetic and phenotypic data, strain an-8(T) represents a novel species of the genus Flavobacterium, for which the name Flavobacterium macrobrachii sp. nov. is proposed. The type strain is an-8(T) (?=?BCRC 17965(T) ?=?LMG 25203(T)).
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| pubmed:language |
eng
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| pubmed:journal | |
| pubmed:citationSubset |
IM
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| pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/DNA, Bacterial,
http://linkedlifedata.com/resource/pubmed/chemical/DNA, Ribosomal,
http://linkedlifedata.com/resource/pubmed/chemical/Fatty Acids,
http://linkedlifedata.com/resource/pubmed/chemical/Phospholipids,
http://linkedlifedata.com/resource/pubmed/chemical/Pigments, Biological,
http://linkedlifedata.com/resource/pubmed/chemical/Quinones,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Ribosomal, 16S,
http://linkedlifedata.com/resource/pubmed/chemical/Sodium Chloride
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| pubmed:status |
MEDLINE
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| pubmed:month |
Jun
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| pubmed:issn |
1466-5034
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| pubmed:author | |
| pubmed:issnType |
Electronic
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| pubmed:volume |
61
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| pubmed:owner |
NLM
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| pubmed:authorsComplete |
Y
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| pubmed:pagination |
1402-7
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| pubmed:meshHeading |
pubmed-meshheading:20601490-Aerobiosis,
pubmed-meshheading:20601490-Animals,
pubmed-meshheading:20601490-Aquaculture,
pubmed-meshheading:20601490-Base Composition,
pubmed-meshheading:20601490-Cluster Analysis,
pubmed-meshheading:20601490-DNA, Bacterial,
pubmed-meshheading:20601490-DNA, Ribosomal,
pubmed-meshheading:20601490-Fatty Acids,
pubmed-meshheading:20601490-Flavobacterium,
pubmed-meshheading:20601490-Fresh Water,
pubmed-meshheading:20601490-Hydrogen-Ion Concentration,
pubmed-meshheading:20601490-Molecular Sequence Data,
pubmed-meshheading:20601490-Palaemonidae,
pubmed-meshheading:20601490-Phospholipids,
pubmed-meshheading:20601490-Phylogeny,
pubmed-meshheading:20601490-Pigments, Biological,
pubmed-meshheading:20601490-Quinones,
pubmed-meshheading:20601490-RNA, Ribosomal, 16S,
pubmed-meshheading:20601490-Sequence Analysis, DNA,
pubmed-meshheading:20601490-Sodium Chloride,
pubmed-meshheading:20601490-Taiwan,
pubmed-meshheading:20601490-Temperature
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| pubmed:year |
2011
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| pubmed:articleTitle |
Flavobacterium macrobrachii sp. nov., isolated from a freshwater shrimp culture pond.
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| pubmed:affiliation |
Department of Marine Biotechnology, National Kaohsiung Marine University, 142 Hai-Chuan Road, Nan-Tzu, Kaohsiung City 811, Taiwan ROC.
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| pubmed:publicationType |
Journal Article
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