Source:http://linkedlifedata.com/resource/pubmed/id/20585943
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
4
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pubmed:dateCreated |
2010-11-5
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pubmed:abstractText |
The Prevotellas comprise a diverse group of bacteria that has received surprisingly limited attention at the whole genome-sequencing level. In this communication, we present the comparative analysis of the genomes of Prevotella ruminicola 23 (GenBank: CP002006) and Prevotella bryantii B(1)4 (GenBank: ADWO00000000), two gastrointestinal isolates. Both P. ruminicola and P. bryantii have acquired an extensive repertoire of glycoside hydrolases that are targeted towards non-cellulosic polysaccharides, especially GH43 bifunctional enzymes. Our analysis demonstrates the diversity of this genus. The results from these analyses highlight their role in the gastrointestinal tract, and provide a template for additional work on genetic characterization of these species.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Nov
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pubmed:issn |
1432-184X
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pubmed:author |
pubmed-author:CoutinhoPedro MPM,
pubmed-author:FoutsDerrick EDE,
pubmed-author:HenrissatBernardB,
pubmed-author:MackieRoderick IRI,
pubmed-author:MorrisonMarkM,
pubmed-author:NelsonKaren EKE,
pubmed-author:North American Consortium for Rumen Bacteria,
pubmed-author:PurusheJanakiJ,
pubmed-author:WhiteBryan ABA
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pubmed:issnType |
Electronic
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pubmed:volume |
60
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
721-9
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pubmed:meshHeading |
pubmed-meshheading:20585943-Animals,
pubmed-meshheading:20585943-Bacterial Proteins,
pubmed-meshheading:20585943-Genome, Bacterial,
pubmed-meshheading:20585943-Molecular Sequence Data,
pubmed-meshheading:20585943-Phylogeny,
pubmed-meshheading:20585943-Prevotella,
pubmed-meshheading:20585943-Prevotella ruminicola,
pubmed-meshheading:20585943-Rumen
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pubmed:year |
2010
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pubmed:articleTitle |
Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche.
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pubmed:affiliation |
Department of Human Genomic Medicine, The J. Craig Venter Institute (JCVI), Rockville, MD 20850, USA. jpurushe@jcvi.org
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, U.S. Gov't, Non-P.H.S.
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