Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
30
pubmed:dateCreated
2010-7-29
pubmed:abstractText
The catalysis of CO(2) hydration by human carbonic anhydrase II (HCA II) is limited in maximal velocity by proton transfer from a zinc-bound water molecule to the proton shuttle His64. This proton transfer occurs along a hydrogen-bonded water network, leading to the proton shuttle residue His64, which in turn transfers the proton to bulk solvent. The side chain of His64 occupies two conformations in wild-type HCA II, pointing inward toward the zinc or outward toward bulk solvent. Previously, several studies have examined the roles of residues of the active site cavity that interact with the solvent-mediated hydrogen-bonded network between His64 and the zinc-bound water. Here these studies are extended to examine the effects on proton transfer by mutation at Lys170 (to Ala, Asp, Glu, and His), a residue located near the side chain of His64 but over 15 A away from the active site zinc. In all four variants, His64 is observed in the inward conformation associated with a decrease in the pK(a) of His64 by as much as 1.0 unit and an increase in the rate constant for proton transfer to as much as 4 micros(-1), approximately 5-fold larger than wild-type HCA II. The results show a significant extension of the effective active site of HCA II from the zinc-bound water at the base of the conical cavity in the enzyme to Lys170 near the rim of the cavity. These data emphasize that the active site of HCA II is extended to include residues that, at first glance, appear to be too far from the zinc to exert any catalytic effects.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-11327835, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-11851394, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-1249, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-15667203, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-15807537, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-16641, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-17319692, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-17330962, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-17550224, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-18247480, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-18942852, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-1909891, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-19438233, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-2514797, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-4621826, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-4964830, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-4994926, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-6294458, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-8673298, http://linkedlifedata.com/resource/pubmed/commentcorrection/20578724-9336012
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
1520-4995
pubmed:author
pubmed:issnType
Electronic
pubmed:day
3
pubmed:volume
49
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
6394-9
pubmed:dateRevised
2011-9-26
pubmed:meshHeading
pubmed:year
2010
pubmed:articleTitle
Structural and kinetic study of the extended active site for proton transfer in human carbonic anhydrase II.
pubmed:affiliation
Department of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32610, USA.
pubmed:publicationType
Journal Article, Research Support, N.I.H., Extramural