Source:http://linkedlifedata.com/resource/pubmed/id/20421627
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
2010-4-27
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pubmed:abstractText |
Myotonic dystrophy type 1 (DM1) is caused by unstable expansion of the CTG repeat in the DMPK gene. According to the hypothesis that expanded CTG repeat alleles originated from larger normal alleles, a correlation exists between prevalence of DM1 and frequency of large normal alleles. We examined the number of CTG repeats in a group of 481 non-DM1 individuals and 116 DM1 patients. Among these subjects, we analyzed the haplotype in 76 unrelated non-DM1 individuals and 14 unrelated DM1 patients using 8 bialleleic markers on the DM1 locus. Different CTG repeats from 5 to 36 and variable allele frequencies were observed. The most common allele was 12 CTG repeats (27.3%), and the frequency of larger normal alleles (>19 CTG repeats) was 3.7%. Haplotype analysis revealed that 100% of alleles with 5 and >19 CTG repeats were haplotype A. In this study, we provide the first haplotypic molecular evidence for a founder effect of DM1 mutations in Korea, and reinforce the hypothesis that out-of-Africa DM1 alleles were derived by expansion from a pool of non-DM1 alleles with haplotype A.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:status |
MEDLINE
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pubmed:issn |
1550-8080
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:volume |
40
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
156-62
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pubmed:meshHeading |
pubmed-meshheading:20421627-Alleles,
pubmed-meshheading:20421627-Alu Elements,
pubmed-meshheading:20421627-Asian Continental Ancestry Group,
pubmed-meshheading:20421627-Gene Frequency,
pubmed-meshheading:20421627-Genetic Loci,
pubmed-meshheading:20421627-Haplotypes,
pubmed-meshheading:20421627-Humans,
pubmed-meshheading:20421627-INDEL Mutation,
pubmed-meshheading:20421627-Myotonic Dystrophy,
pubmed-meshheading:20421627-Trinucleotide Repeats
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pubmed:year |
2010
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pubmed:articleTitle |
Haplotype analysis of the myotonic dystrophy type 1 (DM1) locus in the Korean population.
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pubmed:affiliation |
Department of Laboratory Medicine and Genetics, Samsung Medical Center, 50 Irwon-dong, Gangnam-gu, Seoul 135-710, Republic of Korea.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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