Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 5
pubmed:dateCreated
2010-5-3
pubmed:abstractText
Mycobacterium tuberculosis is able to use a variety of carbon sources in vivo and current knowledge suggests that cholesterol is used as a carbon source during infection. The catabolized cholesterol is used both as an energy source (ATP generation) and as a source of precursor molecules for the synthesis of complex methyl-branched fatty acids. In previous studies, we described a TetR-type transcriptional repressor, kstR, that controls the expression of a number of genes involved in cholesterol catabolism. In this study, we describe a second TetR-type repressor, which we call kstR2. We knocked this gene out in Mycobacterium smegmatis and used microarrays and quantitative RT-PCR to examine the effects on gene expression. We identified a palindromic regulatory motif for KstR2, showed that this motif is present in three promoter regions in mycobacteria and rhodococcus, and demonstrated binding of purified KstR2 to the motif. Using a combination of motif location analysis, gene expression analysis and the examination of gene conservation, we suggest that kstR2 controls the expression of a 15 gene regulon. Like kstR, kstR2 and the kstR2 regulon are highly conserved among the actinomycetes and studies in rhodococcus suggest a role for these genes in cholesterol catabolism. The functional significance of the regulon and implications for the control of cholesterol utilization are discussed.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-10376668, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-10627047, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-10931901, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-10963599, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-11728873, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-11967538, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-12010964, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-12368430, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-12499293, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-12953091, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-14569030, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15070764, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15173120, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15657102, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15895072, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15908407, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15928073, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-15976072, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-16689789, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-17264217, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-17635188, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-17651430, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-17674323, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-18031290, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-18079742, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-18167562, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-18334639, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19014350, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19234303, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19279212, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19300498, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19364125, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19542286, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19822655, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-19906176, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-2082148, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-7584402, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-7984417, http://linkedlifedata.com/resource/pubmed/commentcorrection/20167624-9520501
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
1465-2080
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
156
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1362-71
pubmed:dateRevised
2011-8-1
pubmed:meshHeading
pubmed-meshheading:20167624-Amino Acid Motifs, pubmed-meshheading:20167624-Bacterial Proteins, pubmed-meshheading:20167624-Binding Sites, pubmed-meshheading:20167624-Cholesterol, pubmed-meshheading:20167624-Conserved Sequence, pubmed-meshheading:20167624-Gene Expression Regulation, pubmed-meshheading:20167624-Inverted Repeat Sequences, pubmed-meshheading:20167624-Mycobacterium, pubmed-meshheading:20167624-Mycobacterium smegmatis, pubmed-meshheading:20167624-Mycobacterium tuberculosis, pubmed-meshheading:20167624-Oligonucleotide Array Sequence Analysis, pubmed-meshheading:20167624-Promoter Regions, Genetic, pubmed-meshheading:20167624-Regulon, pubmed-meshheading:20167624-Repressor Proteins, pubmed-meshheading:20167624-Reverse Transcriptase Polymerase Chain Reaction, pubmed-meshheading:20167624-Species Specificity
pubmed:year
2010
pubmed:articleTitle
Cholesterol utilization in mycobacteria is controlled by two TetR-type transcriptional regulators: kstR and kstR2.
pubmed:affiliation
Department of Pathology and Infectious Diseases, The Royal Veterinary College, Centre for Emerging, Endemic and Exotic Disease, Hawkshead Lane, Hertfordshire AL9 7TA, UK. skendall@rvc.ac.uk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't