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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
7
pubmed:dateCreated
2010-5-21
pubmed:abstractText
A 7-year-old Japanese girl with conductive deafness and preauricular fistulae developed proteinuria. She had renal insufficiency, and ultrasound revealed bilateral small kidneys. These findings indicated that she had branchio-oto-renal (BOR) syndrome. In the present patient, we identified, by using multiplex ligation-dependent probe amplification (MLPA) analysis, a heterozygous EYA1 gene deletion comprising at least exons 5 to 7. In her parents, we did not detect any deletion in EYA1 by MLPA, so the deletion was a de novo mutation. PCR analysis and sequencing of patient DNA revealed a heterozygous approximately 17 kb EYA1 deletion starting from the eight last bases of exon 4 and proceeding to base 1,217 of intron 7. Furthermore, in place of this deleted region was inserted a 3756-bp-long interspersed nuclear elements-1 (LINE-1, L1). Accordingly, RT-PCR showed that exons 4-7 were not present in EYA1 mRNA expressed from the mutated allele. Although there are reports of L1 element insertion occurring in various human diseases, this is the first report of a large EYA1 deletion in combination with L1 element insertion.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
1432-198X
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
25
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1343-8
pubmed:meshHeading
pubmed-meshheading:20130917-Abnormalities, Multiple, pubmed-meshheading:20130917-Branchial Region, pubmed-meshheading:20130917-Child, pubmed-meshheading:20130917-Ear, pubmed-meshheading:20130917-Female, pubmed-meshheading:20130917-Gene Deletion, pubmed-meshheading:20130917-Gene Expression Regulation, Developmental, pubmed-meshheading:20130917-Humans, pubmed-meshheading:20130917-Intracellular Signaling Peptides and Proteins, pubmed-meshheading:20130917-Kidney, pubmed-meshheading:20130917-Long Interspersed Nucleotide Elements, pubmed-meshheading:20130917-Mutagenesis, Insertional, pubmed-meshheading:20130917-Nuclear Proteins, pubmed-meshheading:20130917-Nucleic Acid Amplification Techniques, pubmed-meshheading:20130917-Protein Tyrosine Phosphatases, pubmed-meshheading:20130917-RNA, Messenger, pubmed-meshheading:20130917-Renal Insufficiency, pubmed-meshheading:20130917-Syndrome
pubmed:year
2010
pubmed:articleTitle
Branchio-oto-renal syndrome caused by partial EYA1 deletion due to LINE-1 insertion.
pubmed:affiliation
Department of Pediatrics, Saiseikai Yahata General Hospital, 5-9-27, Haruno-machi, Yahatahigashi-ku, Kitakyushu, Fukuoka, 805-0050, Japan. nmorisad7599@yahoo.co.jp
pubmed:publicationType
Journal Article, Case Reports, Research Support, Non-U.S. Gov't