Source:http://linkedlifedata.com/resource/pubmed/id/20077930
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
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pubmed:dateCreated |
2010-1-18
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pubmed:abstractText |
Genetic characteristics of enterovirus type 71 in Shenzhen from 2005 to 2008 were analyzed. All samples were detected by RT-PCR using EV71-specific primers. The VP1s of EV71 strains were amplified and sequenced. A phylogenetic tree was constructed by comparison of the sequences with those of subgenotype A, B and C using DNASTAR, BioEdit and Mega 3.1 softwares. The VP1 nucleotide sequences of 17 strains of Shenzhen shared 95.3%-99.4% identities with cluster C4a, and one strain shared 93.0%-95.6% identities with cluster C4b. The homogeneity of the VP1 nucleotide sequence with subgenotype A and B was 81.8%-86.0%. Among 18 strains, the homogeneity of the VP1 nucleotide sequence was between 92.5%-100%. All EV71 strains circulating in Shenzhen were of subgenotype C4. The predominant strain of EV71 belonged to cluster C4a, also there was cluster C4b.
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pubmed:language |
chi
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Nov
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pubmed:issn |
1000-8721
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
25
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
415-9
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pubmed:meshHeading |
pubmed-meshheading:20077930-Cell Line,
pubmed-meshheading:20077930-China,
pubmed-meshheading:20077930-Enterovirus A, Human,
pubmed-meshheading:20077930-Enterovirus Infections,
pubmed-meshheading:20077930-Feces,
pubmed-meshheading:20077930-Genotype,
pubmed-meshheading:20077930-Humans,
pubmed-meshheading:20077930-Molecular Sequence Data,
pubmed-meshheading:20077930-Phylogeny,
pubmed-meshheading:20077930-Viral Proteins
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pubmed:year |
2009
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pubmed:articleTitle |
[Genetype characteristics of enterovirus type 71 in Shenzhen from 2005 to 2008].
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pubmed:affiliation |
Shenzhen Center for Disease Control and Prevention, Shenzhen 518020, China. heyaqing1019@126.com
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pubmed:publicationType |
Journal Article,
English Abstract,
Research Support, Non-U.S. Gov't
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