19922619

Source:http://linkedlifedata.com/resource/pubmed/id/19922619

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Predicate	Object
rdf:type	pubmed:Citation
lifeskim:mentions	umls-concept:C0017337, umls-concept:C0017428, umls-concept:C0221874, umls-concept:C0392673, umls-concept:C0686817, umls-concept:C1514562
pubmed:dateCreated	2009-11-27
pubmed:abstractText	In prokaryote genomes most of the co-directional genes are in close proximity. Even the coding sequence or the stop codon of a gene can overlap with the Shine-Dalgarno (SD) sequence of the downstream co-directional gene. In this paper we analyze how the presence of SD may influence the stop codon usage or the spacing lengths between co-directional genes.
pubmed:commentsCorrections	http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-10203816, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-10395892, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-10487865, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-10823905, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-10879562, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-10980154, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-11145426, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-11371158, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-11483525, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-11485799, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-11585665, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-11869452, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-12169563, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-12270832, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-12364605, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-12766344, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-1375310, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-14659892, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-15173120, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-15520290, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-16014873, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-16574344, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-16710451, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-16789824, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-17642473, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18227242, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18302730, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18366730, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18420359, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18582175, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18627618, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-18948295, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-19015130, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-19555467, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-2231712, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-2464695, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-3133285, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-4598299, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-7528374, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-7690472, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-8233796, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-8289239, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-8919857, http://linkedlifedata.com/resource/pubmed/commentcorrection/19922619-9466899
pubmed:language	eng
pubmed:journal	http://linkedlifedata.com/resource/pubmed/journal/100965258
pubmed:citationSubset	IM
pubmed:chemical	http://linkedlifedata.com/resource/pubmed/chemical/Codon, Terminator, http://linkedlifedata.com/resource/pubmed/chemical/DNA, Intergenic
pubmed:status	MEDLINE
pubmed:issn	1471-2164
pubmed:author	pubmed-author:García-VallvéSantiagoS, pubmed-author:PallejàAlbertA, pubmed-author:RomeuAntoniA
pubmed:issnType	Electronic
pubmed:volume	10
pubmed:owner	NLM
pubmed:authorsComplete	Y
pubmed:pagination	537
pubmed:dateRevised	2010-9-27
pubmed:meshHeading	pubmed-meshheading:19922619-Adaptation, Biological, pubmed-meshheading:19922619-Base Sequence, pubmed-meshheading:19922619-Codon, Terminator, pubmed-meshheading:19922619-Conserved Sequence, pubmed-meshheading:19922619-DNA, Intergenic, pubmed-meshheading:19922619-Genome, pubmed-meshheading:19922619-Genomics, pubmed-meshheading:19922619-Prokaryotic Cells
pubmed:year	2009
pubmed:articleTitle	Adaptation of the short intergenic spacers between co-directional genes to the Shine-Dalgarno motif among prokaryote genomes.
pubmed:affiliation	Department of Biochemistry and Biotechnology, Rovira i Virgili University, Tarragona, Catalonia, Spain. albert.palleja@urv.cat
pubmed:publicationType	Journal Article, Research Support, Non-U.S. Gov't