Source:http://linkedlifedata.com/resource/pubmed/id/19719119
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
18
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pubmed:dateCreated |
2009-9-17
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pubmed:abstractText |
The aryl hydrocarbon receptor (AhR) is a ligand-activated transcription factor; the AhR Per-AhR/Arnt-Sim (PAS) domain binds ligands. We developed homology models of the AhR PAS domain to characterize previously observed intra- and interspecies differences in ligand binding using molecular docking. In silico structure-based virtual ligand screening using our model resulted in the identification of pinocembrin and 5-hydroxy-7-methoxyflavone, which promoted nuclear translocation and transcriptional activation of AhR and AhR-dependent induction of endogenous target genes.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
1520-4804
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
24
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pubmed:volume |
52
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
5635-41
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pubmed:meshHeading |
pubmed-meshheading:19719119-Amino Acid Sequence,
pubmed-meshheading:19719119-Animals,
pubmed-meshheading:19719119-Cell Line,
pubmed-meshheading:19719119-Cell Nucleus,
pubmed-meshheading:19719119-Drug Evaluation, Preclinical,
pubmed-meshheading:19719119-Humans,
pubmed-meshheading:19719119-Ligands,
pubmed-meshheading:19719119-Mice,
pubmed-meshheading:19719119-Models, Molecular,
pubmed-meshheading:19719119-Molecular Sequence Data,
pubmed-meshheading:19719119-Phylogeny,
pubmed-meshheading:19719119-Protein Conformation,
pubmed-meshheading:19719119-Protein Structure, Tertiary,
pubmed-meshheading:19719119-Protein Transport,
pubmed-meshheading:19719119-Receptors, Aryl Hydrocarbon,
pubmed-meshheading:19719119-Transcriptional Activation,
pubmed-meshheading:19719119-User-Computer Interface
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pubmed:year |
2009
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pubmed:articleTitle |
Modeling of the aryl hydrocarbon receptor (AhR) ligand binding domain and its utility in virtual ligand screening to predict new AhR ligands.
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pubmed:affiliation |
Cancer Biology Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon 97331, USA.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.,
Research Support, Non-U.S. Gov't,
Research Support, N.I.H., Extramural
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