Linked Life Data

19671692

Source:http://linkedlifedata.com/resource/pubmed/id/19671692

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
20
pubmed:dateCreated
2009-10-12
pubmed:abstractText
The RNA-RNA interaction problem (RIP) consists in finding the energetically optimal structure of two RNA molecules that bind to each other. The standard model allows secondary structures in both partners as well as additional base pairs between the two RNAs subject to certain restrictions that ensure that RIP is solvabale by a polynomial time dynamic programming algorithm. RNA-RNA binding, like RNA folding, is typically not dominated by the ground state structure. Instead, a large ensemble of alternative structures contributes to the interaction thermodynamics.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
1367-4811
pubmed:author
pubmed:issnType
Electronic
pubmed:day
15
pubmed:volume
25
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2646-54
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Partition function and base pairing probabilities for RNA-RNA interaction prediction.
pubmed:affiliation
Center for Combinatorics, LPMC-TJKLC, Nankai University Tianjin 300071, P.R. China.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't