Linked Life Data

19656920

Source:http://linkedlifedata.com/resource/pubmed/id/19656920

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 4
pubmed:dateCreated
2010-4-7
pubmed:databankReference
pubmed:abstractText
A taxonomic study was carried out on strain B106(T), which was isolated from a polycyclic aromatic hydrocarbon-degrading consortium, enriched with deep seawater from the Indian Ocean. The isolate was Gram-negative, oxidase- and catalase-positive, rod-shaped and motile by means of one polar flagellum. Growth was observed at salinities of 0.5-11 % and at temperatures of 4-42 degrees C, and the strain was capable of nitrate reduction, but was unable to degrade Tween 80 or gelatin. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain B106(T) belonged to the genus Stappia, with a highest sequence similarity of 97.7 % to Stappia stellulata IAM 12621(T); similarity to other strains was below 95.2 %. DNA-DNA hybridization between strain B106(T) and S. stellulata IAM 12621(T) was 43 %. The major fatty acids were C(16 : 0) (6.10 %), C(18 : 1)omega7c (62.58 %), C(18 : 0) (5.17 %), C(18 : 1)omega7c 11-methyl (14.48 %) and C(19 : 0)omega8c cyclo (4.70 %). The G+C content of the chromosomal DNA was 65.9 mol%. The combined genotypic and phenotypic data showed that strain B106(T) represents a novel species of the genus Stappia, for which the name Stappia indica sp. nov. is proposed, with the type strain B106(T) (=PR56-8(T)=CCTCC AB 208228(T)=LMG 24625(T)=MCCC 1A01226(T)).
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Apr
pubmed:issn
1466-5026
pubmed:author
pubmed:issnType
Print
pubmed:volume
60
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
733-6
pubmed:meshHeading
pubmed:year
2010
pubmed:articleTitle
Stappia indica sp. nov., isolated from deep seawater of the Indian Ocean.
pubmed:affiliation
Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, PR China.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't