Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
8
pubmed:dateCreated
2009-7-31
pubmed:abstractText
We present an efficient pipeline enabling high-throughput analysis of protein structure in solution with small angle X-ray scattering (SAXS). Our SAXS pipeline combines automated sample handling of microliter volumes, temperature and anaerobic control, rapid data collection and data analysis, and couples structural analysis with automated archiving. We subjected 50 representative proteins, mostly from Pyrococcus furiosus, to this pipeline and found that 30 were multimeric structures in solution. SAXS analysis allowed us to distinguish aggregated and unfolded proteins, define global structural parameters and oligomeric states for most samples, identify shapes and similar structures for 25 unknown structures, and determine envelopes for 41 proteins. We believe that high-throughput SAXS is an enabling technology that may change the way that structural genomics research is done.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-10354416, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-10592235, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-10704199, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-10873453, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-11350171, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-11398483, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-11817955, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-12001235, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-12230035, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-12641476, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-13135413, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-15122884, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-15923225, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-16211512, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-16237015, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-16406790, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-16701994, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-17052461, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-17255937, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-17437715, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-17549078, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-17997957, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-18075576, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-18078545, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-18235432, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-18356501, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-18422341, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-18462680, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-2231712, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-7723011, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-8830684, http://linkedlifedata.com/resource/pubmed/commentcorrection/19620974-9585549
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
1548-7105
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
6
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
606-12
pubmed:dateRevised
2011-7-28
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS).
pubmed:affiliation
Physical Bioscience Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S.