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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 9
pubmed:dateCreated
2009-9-4
pubmed:databankReference
pubmed:abstractText
The taxonomic position of a yellow-pigmented bacterial strain, designated DS20T, isolated from a hexachlorocyclohexane dump site at Lucknow, India was determined based on a polyphasic taxonomic characterization. A neighbour-joining tree based on 16S rRNA gene sequences showed that strain DS20T occupied a distinct phylogenetic position in the Sphingobium cluster, showing highest similarity with 'Pseudomonas abikonensis' IAM 12404 (98.8%), followed by Sphingobium rhizovicinum CC-FH12-1T (97.4%) and Sphingobium olei IMMIB HF-1T (97.2%). Therefore, the taxonomic characterization of 'P. abikonensis' NBRC 16140 was also undertaken. Phylogenetic, chemotaxonomic and morphological analyses, based on signature sequences, DNA-DNA hybridizations, fatty acid profiles, physiological characterizations and polar lipid profiles confirmed that both strains DS20T and 'P. abikonensis' NBRC 16140 represent two distinct species of the genus Sphingobium. Therefore, two novel Sphingobium species are proposed, Sphingobium lactosutens sp. nov. (type strain, DS20T=CCM 7540T=MTCC 9471T) and Sphingobium abikonense sp. nov. (type strain, NBRC 16140T=IAM 12404T=KCTC 2864T).
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1466-5026
pubmed:author
pubmed:issnType
Print
pubmed:volume
59
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2291-6
pubmed:meshHeading
pubmed-meshheading:19620380-Bacterial Typing Techniques, pubmed-meshheading:19620380-Cluster Analysis, pubmed-meshheading:19620380-DNA, Bacterial, pubmed-meshheading:19620380-DNA, Ribosomal, pubmed-meshheading:19620380-Fatty Acids, pubmed-meshheading:19620380-India, pubmed-meshheading:19620380-Lindane, pubmed-meshheading:19620380-Molecular Sequence Data, pubmed-meshheading:19620380-Nucleic Acid Hybridization, pubmed-meshheading:19620380-Oils, pubmed-meshheading:19620380-Phospholipids, pubmed-meshheading:19620380-Phylogeny, pubmed-meshheading:19620380-Pigments, Biological, pubmed-meshheading:19620380-RNA, Ribosomal, 16S, pubmed-meshheading:19620380-Sequence Analysis, DNA, pubmed-meshheading:19620380-Soil Microbiology, pubmed-meshheading:19620380-Soil Pollutants, pubmed-meshheading:19620380-Sphingomonadaceae
pubmed:year
2009
pubmed:articleTitle
Sphingobium lactosutens sp. nov., isolated from a hexachlorocyclohexane dump site and Sphingobium abikonense sp. nov., isolated from oil-contaminated soil.
pubmed:affiliation
Molecular Biology Laboratory, Department of Zoology, University of Delhi, Delhi 110007, India.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't