Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
1
pubmed:dateCreated
2009-10-2
pubmed:databankReference
pubmed:abstractText
Rice plant architecture is an important agronomic trait and a major determinant in high productivity. Panicle erectness is the preferred plant architecture in japonica rice, but the molecular mechanism underlying domestication of the erect panicle remains elusive. Here we report the map-based cloning of a major quantitative trait locus, qPE9-1, which plays an integral role in regulation of rice plant architecture including panicle erectness. The R6547 qPE9-1 gene encodes a 426-amino-acid protein, homologous to the keratin-associated protein 5-4 family. The gene is composed of three Von Willebrand factor type C domains, one transmembrane domain, and one 4-disulfide-core domain. Phenotypic comparisons of a set of near-isogenic lines and transgenic lines reveal that the functional allele (qPE9-1) results in drooping panicles, and the loss-of-function mutation (qpe9-1) leads to more erect panicles. In addition, the qPE9-1 locus regulates panicle and grain length, grain weight, and consequently grain yield. We propose that the panicle erectness trait resulted from a natural random loss-of-function mutation for the qPE9-1 gene and has subsequently been the target of artificial selection during japonica rice breeding.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-10421366, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-11939564, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-11961544, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-12077303, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-12242331, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-14671289, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-15611185, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-15976269, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-16453132, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-16713301, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-16850315, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-17216479, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-17417637, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-17851647, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-17908158, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-18219477, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-18444901, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-18454147, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-18604208, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-18820696, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-18820699, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-19305410, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-5334826, http://linkedlifedata.com/resource/pubmed/commentcorrection/19546322-7920717
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1943-2631
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
183
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
315-24
pubmed:dateRevised
2010-9-27
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Deletion in a quantitative trait gene qPE9-1 associated with panicle erectness improves plant architecture during rice domestication.
pubmed:affiliation
Jiangsu Key Laboratory of Crop Genetics and Physiology/Key Laboratory of the Ministry of Education for Plant Functional Genomics, Yangzhou University, Yangzhou 225009, Jiangsu Province, People's Republic of China.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Validation Studies