Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
25
pubmed:dateCreated
2009-6-23
pubmed:abstractText
The archaeal cobY gene encodes the nonorthologous replacement of the bacterial NTP:AdoCbi kinase (EC 2.7.7.62)/GTP:AdoCbi-P guanylyltransferase (EC 3.1.3.73) and is required for de novo synthesis of AdoCbl (coenzyme B(12)). Here we show that ORF MJ1117 of the hyperthermophilic, methanogenic archaeon Methanocaldococcus jannaschii encodes a CobY protein (Mj CobY) that transfers the GMP moiety of GTP to AdoCbi-P to form AdoCbi-GDP. Results from isothermal titration calorimetry (ITC) experiments show that MjCobY binds GTP (K(d) = 5 muM), but it does not bind the GTP analogues GMP-PNP (guanosine 5'-(beta,gamma)-imidotriphosphate) or GMP-PCP (guanylyl 5'-(beta,gamma)-methylenediphosphonate) nor GDP. Results from ITC experiments indicate that MjCobY binds one GTP per dimer. Results from in vivo studies support the conclusion that the 5'-deoxyadenosyl upper ligand of AdoCbi-P is required for MjCobY function. Consistent with these findings, MjCobY displayed high affinity for AdoCbi-P (K(d) = 0.76 muM) but did not bind nonadenosylated Cbi-P. Kinetic parameters for theMj CobY reaction were determined. Results from circular dichroism studies indicate that, in isolation, MjCobY denatures at 80 degrees C with a concomitant loss of activity. We propose that ORF MJ1117 of M. jannaschii be annotated as cobY to reflect its involvement in AdoCbl biosynthesis.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-10464235, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-10829079, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-10894731, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-11153269, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-11790740, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-12013276, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-12486068, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-12869542, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-13278318, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-14729683, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-1483480, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-14888646, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-15215342, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-16109931, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-16936030, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-17209023, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-17339319, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-17483216, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-17693493, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-18252724, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-18260642, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-1953299, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-2403541, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-2844761, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-3156376, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-336607, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-3528128, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-4565618, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-5432063, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-6049462, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-7559521, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-8481088, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-942051, http://linkedlifedata.com/resource/pubmed/commentcorrection/19489548-9799292
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
1520-4995
pubmed:author
pubmed:issnType
Electronic
pubmed:day
30
pubmed:volume
48
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
5882-9
pubmed:dateRevised
2011-5-2
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Biochemical characterization of the GTP:adenosylcobinamide-phosphate guanylyltransferase (CobY) enzyme of the hyperthermophilic archaeon Methanocaldococcus jannaschii.
pubmed:affiliation
Department of Bacteriology, University of Wisconsin at Madison, 1550 Linden Drive, Madison, Wisconsin 53706-1521, USA.
pubmed:publicationType
Journal Article, Comparative Study, Research Support, N.I.H., Extramural