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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
31
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pubmed:dateCreated |
1991-12-13
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pubmed:abstractText |
The three-dimensional structures of apo- and holomutant human lysozymes (D86/92 lysozyme), in which a calcium binding site was designed and created for enhancing molecular stability by replacing both Gln86 and Ala92 with aspartic acids, were refined at 1.8-A resolution by x-ray crystallography. The overall structures and crystallographic thermal factors of all three proteins, the apo-, holo-D86/92, and the wild-type human lysozymes, were essentially identical; these results showed that the introduction of the calcium binding site did not affect either the overall structure or molecular rigidity of the proteins. However, structure analyses of the apo-D86/92 lysozyme revealed that the mutations affected the side chain conformation of residue 86 and hydrogen networks between the protein and the internal solvent molecules. In the structure of the holo-D86/92 lysozyme, seven oxygen ligands formed a slightly distorted pentagonal bipyramid around the calcium ion, indicating that the coordination around the calcium ion was quite similar to that in baboon alpha-lactalbumin. The pentagonal bipyramid coordination could be one of the most widely found and appropriate calcium binding schemes in proteins.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Apoproteins,
http://linkedlifedata.com/resource/pubmed/chemical/Calcium,
http://linkedlifedata.com/resource/pubmed/chemical/Calcium-Binding Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Muramidase,
http://linkedlifedata.com/resource/pubmed/chemical/Solvents,
http://linkedlifedata.com/resource/pubmed/chemical/Water
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pubmed:status |
MEDLINE
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pubmed:month |
Nov
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pubmed:issn |
0021-9258
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
5
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pubmed:volume |
266
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pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
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pubmed:pagination |
20666-71
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:1939116-Apoproteins,
pubmed-meshheading:1939116-Binding Sites,
pubmed-meshheading:1939116-Calcium,
pubmed-meshheading:1939116-Calcium-Binding Proteins,
pubmed-meshheading:1939116-Crystallography,
pubmed-meshheading:1939116-Humans,
pubmed-meshheading:1939116-Muramidase,
pubmed-meshheading:1939116-Mutation,
pubmed-meshheading:1939116-Protein Conformation,
pubmed-meshheading:1939116-Solvents,
pubmed-meshheading:1939116-Structure-Activity Relationship,
pubmed-meshheading:1939116-Water,
pubmed-meshheading:1939116-X-Ray Diffraction
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pubmed:year |
1991
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pubmed:articleTitle |
Crystal structures of the apo- and holomutant human lysozymes with an introduced Ca2+ binding site.
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pubmed:affiliation |
Protein Engineering Research Institute, Osaka, Japan.
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pubmed:publicationType |
Journal Article,
In Vitro
|