Linked Life Data

19369498

Source:http://linkedlifedata.com/resource/pubmed/id/19369498

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
11
pubmed:dateCreated
2009-5-15
pubmed:abstractText
ViaComplex is an open-source application that builds landscape maps of gene expression networks. The motivation for this software comes from two previous publications (Nucleic Acids Res., 35, 1859-1867, 2007; Nucleic Acids Res., 36, 6269-6283, 2008). The first article presents a network-based model of genome stability pathways where we defined a set of genes that characterizes each genetic system. In the second article we analyzed this model by projecting functional information from several experiments onto the gene network topology. In order to systematize the methods developed in these articles, ViaComplex provides tools that may help potential users to assess different high-throughput experiments in the context of six core genome maintenance mechanisms. This model illustrates how different gene networks can be analyzed by the same algorithm. AVAILABILITY: (http://lief.if.ufrgs.br/pub/biosoftwares/viacomplex).
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
1367-4811
pubmed:author
pubmed:issnType
Electronic
pubmed:day
1
pubmed:volume
25
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1468-9
pubmed:dateRevised
2009-11-4
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
ViaComplex: software for landscape analysis of gene expression networks in genomic context.
pubmed:affiliation
Unidade de Bioinformática, Departamento de Bioquímica, Instituto de Física, Núcleo de Bioinformática, Departamento de Genética, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil. mauro@ufrgs.br
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't