Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
5
pubmed:dateCreated
2009-5-27
pubmed:abstractText
Germline mutations in complement genes have been associated with susceptibility to infections and autoimmune diseases, conditions that are associated with non-Hodgkin lymphoma (NHL) risk. To test the hypothesis that common genetic variation in complement genes affect risk of NHL, we genotyped 167 single nucleotide polymorphisms (SNPs) from 31 genes in 441 NHL cases and 475 controls. Principal components (PC) and haplotype analyses were used for gene-level tests of NHL risk, while individual SNPs were modelled as having a log-additive effect. In gene level PC analyses, C2 (P = 0.023), C5 (P = 0.0032) and C9 (P = 0.020) were associated with NHL risk; haplotype analyses showed similar results, as well as a haplotype association for C7 (P = 0.046). When all four genes were considered simultaneously, only C5 and C9 remained significant (P < 0.05). In SNP level results from these genes, 10 SNPs had a P < 0.05. However, after correcting for multiple testing, only the C5 SNPs rs7026551 (q = 0.015; OR = 1.54, 95% CI 1.21-1.95) and rs2416810 (q = 0.015; OR = 1.57; 95% CI 1.22-2.01), and the C9 SNP rs187875 (q = 0.015; OR = 0.68; 95% 0.56-0.84) remained noteworthy. Associations were similar for the common NHL subtypes. In summary, we provide evidence for a role of genetic variation in complement genes, particularly C5 and C9, and NHL risk.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-10333435, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-10562709, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-10835412, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-11107496, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-11256743, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-11414363, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-11791212, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-14685227, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-15643297, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-15687290, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-1577763, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-15995705, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-16332926, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-16389181, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-16518403, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-16740140, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-16936732, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-16971956, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17018637, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17327408, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17410554, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17606447, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17640961, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17804836, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17827388, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-17880261, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-18287387, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-18567839, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-18820683, http://linkedlifedata.com/resource/pubmed/commentcorrection/19344414-9700192
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
1365-2141
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
145
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
614-23
pubmed:dateRevised
2011-6-1
pubmed:meshHeading
pubmed-meshheading:19344414-Case-Control Studies, pubmed-meshheading:19344414-Chromosome Mapping, pubmed-meshheading:19344414-Complement C5, pubmed-meshheading:19344414-Complement C9, pubmed-meshheading:19344414-Complement System Proteins, pubmed-meshheading:19344414-Female, pubmed-meshheading:19344414-Genetic Predisposition to Disease, pubmed-meshheading:19344414-Germ-Line Mutation, pubmed-meshheading:19344414-Haplotypes, pubmed-meshheading:19344414-Humans, pubmed-meshheading:19344414-Logistic Models, pubmed-meshheading:19344414-Lymphoma, Non-Hodgkin, pubmed-meshheading:19344414-Male, pubmed-meshheading:19344414-Middle Aged, pubmed-meshheading:19344414-Polymorphism, Single Nucleotide, pubmed-meshheading:19344414-Principal Component Analysis, pubmed-meshheading:19344414-Risk Assessment, pubmed-meshheading:19344414-TNF Receptor-Associated Factor 1
pubmed:year
2009
pubmed:articleTitle
Risk of non-Hodgkin lymphoma in association with germline variation in complement genes.
pubmed:affiliation
Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic College of Medicine, 200 First Street SW, Rochester, MN 55905, USA. cerhan.james@mayo.edu
pubmed:publicationType
Journal Article