Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
2009-6-3
pubmed:abstractText
The zebrafish ventricular myosin heavy chain (vmhc) gene exhibits restricted expression in the ventricle. However, the molecular mechanism underlying this chamber-specific expression is unclear. Here, we exploited both transient and transgenic technologies to dissect the zebrafish vmhc promoter. We demonstrated that a combination of two transient assays in this animal model quickly identified chamber-specific cis-elements, isolating a 2.2 kb fragment upstream from the vmhc gene that can drive ventricle-specific expression. Furthermore, deletion analysis identified multiple cis-elements that exhibited cardiac-specific expression. To achieve chamber specificity, a distal element was required to coordinate with and suppress a proximal enhancer element. Finally, we discovered that Nkx2.5-binding sites (NKE) were essential for this repressive function. In summary, our study of the zebrafish vmhc promoter suggests that ventricle-specific expression is achieved through an inhibitory mechanism that suppresses expression in the atrium. Developmental Dynamics 238:1564-1573, 2009. (c) 2009 Wiley-Liss, Inc.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10024241, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10075728, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10207136, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10491254, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10625552, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10679931, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-10998641, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-11027340, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-11382777, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-11431700, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-11784028, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-12023302, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-12392994, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-12933792, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-12941624, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-12950077, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-14506305, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-14573521, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-14576202, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-14720469, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-15042700, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-15215394, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-15215400, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-15239961, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-16556802, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-17170364, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-17406414, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-17681136, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-17937395, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-17948311, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-18047699, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-18047700, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-18343897, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-18718462, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-2695741, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-3378672, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-3410155, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-7657806, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-8207020, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-8674419, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-8702693, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-8779712, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-8887666, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-8970733, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-9111345, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-9149143, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-9550726, http://linkedlifedata.com/resource/pubmed/commentcorrection/19322764-9694800
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
1058-8388
pubmed:author
pubmed:issnType
Print
pubmed:volume
238
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1564-73
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Transient and transgenic analysis of the zebrafish ventricular myosin heavy chain (vmhc) promoter: an inhibitory mechanism of ventricle-specific gene expression.
pubmed:affiliation
Department of Biochemistry and Molecular Biology/Division of Cardiovascular Diseases, Mayo Clinic College of Medicine, Rochester, Minnesota, USA.
pubmed:publicationType
Journal Article, Research Support, N.I.H., Extramural