Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
9
pubmed:dateCreated
2009-4-28
pubmed:databankReference
pubmed:abstractText
Diphenylamine (DPA) is a common contaminant at munitions-contaminated sites as well as at aniline manufacturing sites. Little is known about the biodegradation of the compound, and bacteria able to use DPA as the growth substrate have not been reported. Burkholderia sp. strain JS667 and Ralstonia sp. strain JS668 were isolated by selective enrichment from DPA-contaminated sediment. The isolates grew aerobically with DPA as the sole carbon, nitrogen, and energy source. During induction of DPA degradation, stoichiometric amounts of aniline accumulated and then disappeared, which suggested that aniline is on the DPA degradation pathway. Genes encoding the enzymes that catalyze the initial steps in DPA degradation were cloned from the genomic DNA of strain JS667. The Escherichia coli clone catalyzed stoichiometric transformation of DPA to aniline and catechol. Transposon mutagenesis, the sequence similarity of putative open reading frames to those of well-characterized dioxygenases, and (18)O(2) experiments support the conclusion that the initial reaction in DPA degradation is catalyzed by a multicomponent ring-hydroxylating dioxygenase. DPA is converted to aniline and catechol via dioxygenation at the 1,2 position of the aromatic ring and spontaneous rearomatization. Aniline and catechol are further biodegraded by the well-established aniline degradation pathway. Genes that encode the complete aniline degradation pathway were found 12 kb downstream of the genes that encode the initial dioxygenase. Expression of the relevant dioxygenases was confirmed by reverse transcription-PCR analysis. Both the sequence similarity and the gene organization suggest that the DPA degradation pathway evolved recently by the recruitment of two gene clusters that encode the DPA dioxygenase and aniline degradation pathway.
pubmed:commentsCorrections
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pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
1098-5336
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
75
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2694-704
pubmed:dateRevised
2010-9-23
pubmed:meshHeading
pubmed-meshheading:19251893-Aerobiosis, pubmed-meshheading:19251893-Aniline Compounds, pubmed-meshheading:19251893-Burkholderia, pubmed-meshheading:19251893-Catechols, pubmed-meshheading:19251893-Cloning, Molecular, pubmed-meshheading:19251893-DNA, Bacterial, pubmed-meshheading:19251893-Dioxygenases, pubmed-meshheading:19251893-Diphenylamine, pubmed-meshheading:19251893-Escherichia coli, pubmed-meshheading:19251893-Evolution, Molecular, pubmed-meshheading:19251893-Gene Expression Profiling, pubmed-meshheading:19251893-Gene Order, pubmed-meshheading:19251893-Metabolic Networks and Pathways, pubmed-meshheading:19251893-Molecular Sequence Data, pubmed-meshheading:19251893-Mutagenesis, Insertional, pubmed-meshheading:19251893-Oxygen Isotopes, pubmed-meshheading:19251893-Ralstonia, pubmed-meshheading:19251893-Sequence Analysis, DNA, pubmed-meshheading:19251893-Sequence Homology, Amino Acid
pubmed:year
2009
pubmed:articleTitle
Pathway and evolutionary implications of diphenylamine biodegradation by Burkholderia sp. strain JS667.
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