Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2009-2-13
pubmed:abstractText
Zinc finger nucleases (ZFNs) have been used successfully to create genome-specific double-strand breaks and thereby stimulate gene targeting by several thousand fold. ZFNs are chimeric proteins composed of a specific DNA-binding domain linked to a non-specific DNA-cleavage domain. By changing key residues in the recognition helix of the specific DNA-binding domain, one can alter the ZFN binding specificity and thereby change the sequence to which a ZFN pair is being targeted. For these and other reasons, ZFNs are being pursued as reagents for genome modification, including use in gene therapy. In order for ZFNs to reach their full potential, it is important to attenuate the cytotoxic effects currently associated with many ZFNs. Here, we evaluate two potential strategies for reducing toxicity by regulating protein levels. Both strategies involve creating ZFNs with shortened half-lives and then regulating protein level with small molecules. First, we destabilize ZFNs by linking a ubiquitin moiety to the N-terminus and regulate ZFN levels using a proteasome inhibitor. Second, we destabilize ZFNs by linking a modified destabilizing FKBP12 domain to the N-terminus and regulate ZFN levels by using a small molecule that blocks the destabilization effect of the N-terminal domain. We show that by regulating protein levels, we can maintain high rates of ZFN-mediated gene targeting while reducing ZFN toxicity.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-10494832, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-10802622, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-11242102, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-12136019, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-12724414, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-12730593, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-12730594, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-15279767, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-15279806, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-15684609, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-15806097, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-15931173, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-16082368, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-16169774, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-16251401, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-16452139, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-16959577, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-17360608, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-17603093, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-17603475, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-17603476, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18026168, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18334988, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18446154, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18500334, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18500337, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18587387, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-18657511, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-3018930, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-6273866, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-7615550, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-7891691, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-8559659, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-8622983, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-8901547, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-8972207, http://linkedlifedata.com/resource/pubmed/commentcorrection/19214211-9112437
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
1553-7404
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
5
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
e1000376
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Attenuation of zinc finger nuclease toxicity by small-molecule regulation of protein levels.
pubmed:affiliation
Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural