rdf:type |
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lifeskim:mentions |
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pubmed:issue |
12
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pubmed:dateCreated |
2009-6-23
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pubmed:abstractText |
A phosphoramidite reagent of N6-(2-deoxy-D-erythro-pentofuranosyl)-2,6-diamino-1,4-dihydro-4-oxo-5-N-methylformamidopyrimidine (MeFapy-dGuo) lesions was synthesized in four steps from 2'-deoxyguanosine. Fapy nucleosides can rearrange to the pyranose form when the 5'-hydroxyl group is unprotected. The phosphoramidite was incorporated into oligonucleotides using solid-phase synthesis by adjusting the deprotection time for removal of the 5'-dimethoxytrityl group of the MeFapy-dGuo nucleotide, thereby minimizing its rearrangement to the ribopyranose. The furanose and pyranose forms were differentiated by a series of two-dimensional NMR experiments.
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pubmed:grant |
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pubmed:commentsCorrections |
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Dec
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pubmed:issn |
0893-228X
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pubmed:author |
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pubmed:issnType |
Print
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pubmed:volume |
21
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
2324-33
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pubmed:dateRevised |
2011-8-19
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pubmed:meshHeading |
pubmed-meshheading:19053322-Chromatography, High Pressure Liquid,
pubmed-meshheading:19053322-DNA Damage,
pubmed-meshheading:19053322-Deoxyguanosine,
pubmed-meshheading:19053322-Formamides,
pubmed-meshheading:19053322-Magnetic Resonance Spectroscopy,
pubmed-meshheading:19053322-Methylation,
pubmed-meshheading:19053322-Oligonucleotides,
pubmed-meshheading:19053322-Organophosphorus Compounds,
pubmed-meshheading:19053322-Pyrimidines,
pubmed-meshheading:19053322-Spectrometry, Mass, Matrix-Assisted Laser...
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pubmed:year |
2008
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pubmed:articleTitle |
Site-specific synthesis and characterization of oligonucleotides containing an N6-(2-deoxy-D-erythro-pentofuranosyl)-2,6-diamino-3,4-dihydro-4-oxo-5-N-methylformamidopyrimidine lesion, the ring-opened product from N7-methylation of deoxyguanosine.
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pubmed:affiliation |
Department of Chemistr, Center in Molecular Toxicology, Vanderbilt University, Nashville, Tennessee 37235-1822, USA.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't,
Research Support, N.I.H., Extramural
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