Source:http://linkedlifedata.com/resource/pubmed/id/19024017
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
2008-11-21
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pubmed:abstractText |
We developed a method of identification of Mycobacterium tuberculosis with simultaneous evaluation of the sensitivity to fluoroquinolones on a biological microchip array. The method of multiplex two-staged PCR followed by hybridization of a biochip makes it possible to detect 8 mutant variants of gyrA gene occurring in fluoroquinolone-resistant strains (approximately 85% all resistant forms) within 1 day. Using this method we analyzed 107 cultures isolated from patients with tuberculosis and 78 sputum samples. Mutations in gyrA gene were detected in 48 (92%) resistant strains. Natural S95T polymorphism in gyrA gene was detected in all resistant and in 76% sensitive strains. The sensitivity and specificity of the proposed method calculated on the basis of the analysis of sputum samples (n=78) were 94 and 100%, respectively.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jan
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pubmed:issn |
0007-4888
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pubmed:author |
pubmed-author:AntonovaO VOV,
pubmed-author:ChernousovaL NLN,
pubmed-author:GryadunovD ADA,
pubmed-author:Kuz'minA VAV,
pubmed-author:LarionovaE EEE,
pubmed-author:LinnJ EJE,
pubmed-author:MikhailovichV MVM,
pubmed-author:MorozA MAM,
pubmed-author:NosovaE YEY,
pubmed-author:SkotnikovaO IOI,
pubmed-author:SmirnovaT GTG,
pubmed-author:ZasedatelevA SAS
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pubmed:issnType |
Print
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pubmed:volume |
145
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
108-13
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pubmed:meshHeading |
pubmed-meshheading:19024017-Antitubercular Agents,
pubmed-meshheading:19024017-Base Sequence,
pubmed-meshheading:19024017-Drug Resistance, Multiple, Bacterial,
pubmed-meshheading:19024017-Fluoroquinolones,
pubmed-meshheading:19024017-Humans,
pubmed-meshheading:19024017-Hybridization, Genetic,
pubmed-meshheading:19024017-Microarray Analysis,
pubmed-meshheading:19024017-Microbial Sensitivity Tests,
pubmed-meshheading:19024017-Mutation,
pubmed-meshheading:19024017-Mycobacterium tuberculosis,
pubmed-meshheading:19024017-Tuberculosis, Multidrug-Resistant
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pubmed:year |
2008
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pubmed:articleTitle |
Detection of mutations in Mycobacterium tuberculosis genome determining resistance to fluoroquinolones by hybridization on biological microchips.
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pubmed:affiliation |
V. A. Engel'gard Institute of Molecular Biology, Russian Academy of Sciences, Moscow. markova@biochip.ru
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pubmed:publicationType |
Journal Article,
Evaluation Studies
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