Source:http://linkedlifedata.com/resource/pubmed/id/18951793
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
23
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pubmed:dateCreated |
2008-11-13
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pubmed:abstractText |
For the first time, a set of experimentally reported [60] fullerene derivatives were subjected to the 3D-QSAR/CoMFA and CoMSIA studies. The aim of this study is to propose a series of novel [60] fullerene-based inhibitors with optimal binding affinity for the HIV-1 PR enzyme. The position of the template molecule at the cavity of HIV-1 PR was optimized and 3D QSAR models were developed. Relative contributions of steric/electrostatic fields of the 3D-QSAR/CoMFA and CoMSIA models have shown that steric effects govern the bioactivity of the compounds, but electrostatic interactions play also an important role.The de novo drug design Leapfrog simulations provided a series of novel compounds with predicted improved inhibition effect.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Dec
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pubmed:issn |
1464-3405
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
1
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pubmed:volume |
18
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
6283-9
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pubmed:dateRevised |
2009-11-19
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pubmed:meshHeading |
pubmed-meshheading:18951793-Amino Acids,
pubmed-meshheading:18951793-Anti-HIV Agents,
pubmed-meshheading:18951793-Aspartic Acid Endopeptidases,
pubmed-meshheading:18951793-Binding Sites,
pubmed-meshheading:18951793-Computer Simulation,
pubmed-meshheading:18951793-Fullerenes,
pubmed-meshheading:18951793-HIV-1,
pubmed-meshheading:18951793-Models, Molecular,
pubmed-meshheading:18951793-Molecular Structure,
pubmed-meshheading:18951793-Protein Binding,
pubmed-meshheading:18951793-Quantitative Structure-Activity Relationship
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pubmed:year |
2008
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pubmed:articleTitle |
3D QSAR CoMFA/CoMSIA, molecular docking and molecular dynamics studies of fullerene-based HIV-1 PR inhibitors.
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pubmed:affiliation |
Institute of Organic and Pharmaceutical Chemistry, The National Hellenic Research Foundation, Vas. Constantinou Ave. 48, 11635 Athens, Greece. durdagis@eie.gr
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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